RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 RLFQ13129 1914 aa12.7□□□□□ -0.38
LINC00963-207ENST00000454635 PLXNA1Q9UIW2 1896 aa12.7□□□□□ -0.38
LINC00963-207ENST00000454635 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 SHMT1P34896 483 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 RRP1BQ14684 758 aaKnown RBP12.69□□□□□ -0.38
LINC00963-207ENST00000454635 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
LINC00963-207ENST00000454635 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 ANKRD13CQ8N6S4 541 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 ZNF333Q96JL9 665 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
LINC00963-207ENST00000454635 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
LINC00963-207ENST00000454635 GRK4P32298 578 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 HERVK_113P62684 666 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 CCNA1P78396 465 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 C16orf86Q6ZW13 317 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 LPAR1Q92633 364 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 ARHGAP39Q9C0H5 1083 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
LINC00963-207ENST00000454635 MORF4L1Q9UBU8 362 aa12.68□□□□□ -0.38
LINC00963-207ENST00000454635 SALL3Q9BXA9 1300 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 MKI67P46013 3256 aaKnown RBP12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L15C9J2P7 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L13C9JLJ4 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L12C9JPN9 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L11C9JVI0 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L21D6R901 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L18D6R9N7 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L22D6RA61 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L17D6RBQ6 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L19D6RCP7 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L20D6RJB6 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 GPAA1O43292 621 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 TDO2P48775 406 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 USP17L24Q0WX57 530 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 IRF5Q13568 498 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
LINC00963-207ENST00000454635 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
LINC00963-207ENST00000454635 CWC22Q9HCG8 908 aaKnown RBP12.67□□□□□ -0.38
LINC00963-207ENST00000454635 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-207ENST00000454635 IGHDP01880 384 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 APPP05067 770 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 MAPK4P31152 587 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 ICA1Q05084 483 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 PRKCZQ05513 592 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 ZYXQ15942 572 aaKnown RBP12.66□□□□□ -0.38
LINC00963-207ENST00000454635 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 TSHZ3Q63HK5 1081 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 MKNK2Q9HBH9 465 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
LINC00963-207ENST00000454635 PRKAB2O43741 272 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 VCAM1P19320 739 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 CDK8P49336 464 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-207ENST00000454635 PDE4BQ07343 736 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 SEPT2Q15019 361 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 CTR9Q6PD62 1173 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 LBX2Q6XYB7 198 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 TRMT44Q8IYL2 757 aaKnown RBP12.65□□□□□ -0.38
LINC00963-207ENST00000454635 NAPBQ9H115 298 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 KANSL2Q9H9L4 492 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 RABGAP1Q9Y3P9 1069 aa12.65□□□□□ -0.38
LINC00963-207ENST00000454635 MYH6P13533 1939 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 PATL2C9JE40 543 aaKnown RBP12.64□□□□□ -0.39
LINC00963-207ENST00000454635 ADCY3O60266 1144 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 FLT3LGP49771 235 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 PDE1AP54750 535 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
LINC00963-207ENST00000454635 ERVK-9P63128 1117 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 ERVK-24P63145 666 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 JAG1P78504 1218 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 CAP1Q01518 475 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 TANGO6Q9C0B7 1094 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
LINC00963-207ENST00000454635 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 MINDY4BA8MYZ0 360 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
LINC00963-207ENST00000454635 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-207ENST00000454635 CYP2D6P10635 497 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 CTGFP29279 349 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 ZMYM1Q5SVZ6 1142 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 CATSPERGQ6ZRH7 1159 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 ZNF444Q8N0Y2 327 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-207ENST00000454635 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-207ENST00000454635 DYNLL2Q96FJ2 89 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
LINC00963-207ENST00000454635 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms