RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 GTF3C2Q8WUA4 911 aaPredicted RBP14.49□□□□□ -0.09
USP40-210ENST00000454354 APPBP2Q92624 585 aa14.49□□□□□ -0.09
USP40-210ENST00000454354 P2RX7Q99572 595 aaKnown RBP14.49□□□□□ -0.09
USP40-210ENST00000454354 SLC4A4Q9Y6R1 1079 aa14.49□□□□□ -0.09
USP40-210ENST00000454354 COL11A1P12107 1806 aaPredicted RBP14.49□□□□□ -0.09
USP40-210ENST00000454354 RNF113AO15541 343 aaKnown RBP14.48□□□□□ -0.09
USP40-210ENST00000454354 GLRX3O76003 335 aaKnown RBP14.48□□□□□ -0.09
USP40-210ENST00000454354 EN2P19622 333 aaPredicted RBP14.48□□□□□ -0.09
USP40-210ENST00000454354 MX1P20591 662 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 FLT3LGP49771 235 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 SEPT2Q15019 361 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 TMEM179Q6ZVK1 233 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 C16orf86Q6ZW13 317 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 AMOTL1Q8IY63 956 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 SLC44A5Q8NCS7 719 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 ACER1Q8TDN7 264 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 OTUD7AQ8TE49 926 aaPredicted RBP14.48□□□□□ -0.09
USP40-210ENST00000454354 PXYLP1Q8TE99 480 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 COA7Q96BR5 231 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 GCC1Q96CN9 775 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 DYNLL2Q96FJ2 89 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 DDRGK1Q96HY6 314 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 STRBPQ96SI9 672 aaKnown RBP14.48□□□□□ -0.09
USP40-210ENST00000454354 FEZ1Q99689 392 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
USP40-210ENST00000454354 ROBO3Q96MS0 1386 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L15C9J2P7 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L13C9JLJ4 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L12C9JPN9 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L11C9JVI0 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L21D6R901 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L18D6R9N7 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L22D6RA61 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L17D6RBQ6 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L19D6RCP7 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L20D6RJB6 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 VCAM1P19320 739 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 USP17L24Q0WX57 530 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 MTFR1Q15390 333 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 LRRFIP1Q32MZ4 808 aaKnown RBP14.47□□□□□ -0.09
USP40-210ENST00000454354 GIMAP6Q6P9H5 292 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 CTR9Q6PD62 1173 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 OSBP2Q969R2 916 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 TXNRD2Q9NNW7 524 aa14.47□□□□□ -0.09
USP40-210ENST00000454354 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
USP40-210ENST00000454354 FRMPD3Q5JV73 1810 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 A0A1W2PRG0 241 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 GSG1L2A8MUP6 293 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 SMIM22K7EJ46 135 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 ADCY3O60266 1144 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 AKR1B1P15121 316 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 CDK8P49336 464 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 UBXN2AP68543 259 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.09
USP40-210ENST00000454354 SBK1Q52WX2 424 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 POTEEQ6S8J3 1075 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 CATSPERGQ6ZRH7 1159 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 CCDC17Q96LX7 622 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 RBPJLQ9UBG7 517 aa14.46□□□□□ -0.09
USP40-210ENST00000454354 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
USP40-210ENST00000454354 GPAA1O43292 621 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 GNAT2P19087 354 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 ERVK-9P63128 1117 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 ERVK-24P63145 666 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 STAP2Q9UGK3 403 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 GJD2Q9UKL4 321 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
USP40-210ENST00000454354 ZNFX1Q9P2E3 1918 aaKnown RBP14.45□□□□□ -0.1
USP40-210ENST00000454354 M0R2C6 588 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
USP40-210ENST00000454354 GJB1P08034 283 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 CCL5P13501 91 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 ELNP15502 786 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 MAPK4P31152 587 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 ANKRD45Q5TZF3 282 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 PRPF38BQ5VTL8 546 aaKnown RBP14.44□□□□□ -0.1
USP40-210ENST00000454354 SHISA4Q96DD7 197 aa14.44□□□□□ -0.1
USP40-210ENST00000454354 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
USP40-210ENST00000454354 EPB41L4AQ9HCS5 686 aaPredicted RBP14.44□□□□□ -0.1
USP40-210ENST00000454354 SPDYE16A6NNV3 312 aaPredicted RBP14.43□□□□□ -0.1
USP40-210ENST00000454354 PEX10O60683 326 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 CNMDO75829 334 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 INHAP05111 366 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 GJA8P48165 433 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 ICA1Q05084 483 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 Q3C1V9 767 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 SIAH1Q8IUQ4 282 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 NKX2-3Q8TAU0 364 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 LPAR1Q92633 364 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 RNF208Q9H0X6 261 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 SH2D4AQ9H788 454 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 ARHGEF10LQ9HCE6 1279 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 BIN2Q9UBW5 565 aaPredicted RBP14.43□□□□□ -0.1
USP40-210ENST00000454354 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
USP40-210ENST00000454354 TMX2Q9Y320 296 aa14.43□□□□□ -0.1
USP40-210ENST00000454354 ALPK3Q96L96 1907 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms