RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 C12orf42Q96LP6 360 aa12.83□□□□□ -0.36
DDX39A-203ENST00000454233 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
DDX39A-203ENST00000454233 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
DDX39A-203ENST00000454233 RBBP6Q7Z6E9 1792 aaKnown RBP12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 ADCY3O60266 1144 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 EN2P19622 333 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-203ENST00000454233 EVX2Q03828 476 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 IRF5Q13568 498 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 CCAR1Q8IX12 1150 aaKnown RBP12.82□□□□□ -0.36
DDX39A-203ENST00000454233 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 GPRC5AQ8NFJ5 357 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 CCDC17Q96LX7 622 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
DDX39A-203ENST00000454233 FSD1Q9BTV5 496 aa12.82□□□□□ -0.36
DDX39A-203ENST00000454233 ARPP21Q9UBL0 812 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-203ENST00000454233 CYP2D7A0A087X1C5 515 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 GNAT2P19087 354 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 GUCY1A2P33402 732 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 CDK8P49336 464 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 GIMAP6Q6P9H5 292 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 C16orf86Q6ZW13 317 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 PI4K2BQ8TCG2 481 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-203ENST00000454233 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 OSBP2Q969R2 916 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 PAGR1Q9BTK6 254 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
DDX39A-203ENST00000454233 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
DDX39A-203ENST00000454233 PDE4DIPQ5VU43 2346 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 GPAA1O43292 621 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 AKR1B1P15121 316 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 VCAM1P19320 739 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 MTFR1Q15390 333 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-203ENST00000454233 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
DDX39A-203ENST00000454233 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
DDX39A-203ENST00000454233 HTTP42858 3142 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 APPP05067 770 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 CCL5P13501 91 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 ELNP15502 786 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 MAPK4P31152 587 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 TDO2P48775 406 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 ERVK-9P63128 1117 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 ERVK-24P63145 666 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 CCNA1P78396 465 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 ICA1Q05084 483 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 SBK1Q52WX2 424 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 RNF208Q9H0X6 261 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 RPAP3Q9H6T3 665 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-203ENST00000454233 TXNRD2Q9NNW7 524 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 RBPJLQ9UBG7 517 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 MYH8P13535 1937 aa12.79□□□□□ -0.36
DDX39A-203ENST00000454233 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 MINDY4BA8MYZ0 360 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 M0R2C6 588 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 INHAP05111 366 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 GJB1P08034 283 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 SOCS4Q8WXH5 440 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 LPAR1Q92633 364 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 NUDT12Q9BQG2 462 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 TANGO6Q9C0B7 1094 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
DDX39A-203ENST00000454233 PATL2C9JE40 543 aaKnown RBP12.77□□□□□ -0.37
DDX39A-203ENST00000454233 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 PEX10O60683 326 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 PDE1AP54750 535 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 Q3C1V9 767 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 PRPF38BQ5VTL8 546 aaKnown RBP12.77□□□□□ -0.37
DDX39A-203ENST00000454233 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 EVI5LQ96CN4 794 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 UNC93B1Q9H1C4 597 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 KANSL2Q9H9L4 492 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 ZNF287Q9HBT7 754 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 GJD2Q9UKL4 321 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 TMX2Q9Y320 296 aa12.77□□□□□ -0.37
DDX39A-203ENST00000454233 HMGCRP04035 888 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 CYP2B6P20813 491 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 GJA8P48165 433 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 COG2Q14746 738 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms