RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 MORN1Q5T089 497 aa28.86■■■□□ 2.21
LYSMD2-202ENST00000454181 C12orf42Q96LP6 360 aa28.86■■■□□ 2.21
LYSMD2-202ENST00000454181 APBA2Q99767 749 aa28.86■■■□□ 2.21
LYSMD2-202ENST00000454181 SZT2Q5T011 3432 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 RLBP1P12271 317 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 BMP8BP34820 402 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 USP6NLQ92738 828 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 GDF15Q99988 308 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 ANTXR1Q9H6X2 564 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 EXOC6BQ9Y2D4 811 aa28.85■■■□□ 2.21
LYSMD2-202ENST00000454181 POLR3DP05423 398 aaPredicted RBP28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 SYN1P17600 705 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 MNX1P50219 401 aaPredicted RBP28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 CCL14Q16627 93 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 HSP90AB4PQ58FF6 505 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 CEP85Q6P2H3 762 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 EDC3Q96F86 508 aaKnown RBP28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 KIAA1683Q9H0B3 1180 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 FOCADQ5VW36 1801 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 CDK5RAP2Q96SN8 1893 aa28.84■■■□□ 2.21
LYSMD2-202ENST00000454181 SOX1O00570 391 aaPredicted RBP28.83■■■□□ 2.21
LYSMD2-202ENST00000454181 MAP2K5Q13163 448 aa28.83■■■□□ 2.21
LYSMD2-202ENST00000454181 TTF1Q15361 905 aaPredicted RBP28.83■■■□□ 2.21
LYSMD2-202ENST00000454181 CATSPERGQ6ZRH7 1159 aa28.83■■■□□ 2.21
LYSMD2-202ENST00000454181 LRCH3Q96II8 777 aa28.83■■■□□ 2.21
LYSMD2-202ENST00000454181 IVNS1ABPQ9Y6Y0 642 aa28.83■■■□□ 2.21
LYSMD2-202ENST00000454181 MYO5AQ9Y4I1 1855 aaKnown RBP28.83■■■□□ 2.2
LYSMD2-202ENST00000454181 MAGEB6P1A0A0J9YX57 407 aa28.82■■■□□ 2.2
LYSMD2-202ENST00000454181 CCND3P30281 292 aaPredicted RBP28.82■■■□□ 2.2
LYSMD2-202ENST00000454181 MFSD14CQ5VZR4 134 aa28.82■■■□□ 2.2
LYSMD2-202ENST00000454181 PLXNB2O15031 1838 aa28.82■■■□□ 2.2
LYSMD2-202ENST00000454181 VCAM1P19320 739 aa28.81■■■□□ 2.2
LYSMD2-202ENST00000454181 ACER1Q8TDN7 264 aa28.8■■■□□ 2.2
LYSMD2-202ENST00000454181 CRNKL1Q9BZJ0 848 aaKnown RBP28.8■■■□□ 2.2
LYSMD2-202ENST00000454181 MYH1P12882 1939 aa28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 SLC15A5A6NIM6 579 aa28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 MAGEA10P43363 369 aaPredicted RBP28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 PLCD1P51178 756 aa28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 POTEEQ6S8J3 1075 aa28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 IL1RAPL2Q9NP60 686 aa28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 DDX60LQ5H9U9 1706 aaKnown RBP28.79■■■□□ 2.2
LYSMD2-202ENST00000454181 PFASO15067 1338 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 MPHOSPH10O00566 681 aaKnown RBP28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 CNMDO75829 334 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 PTPREP23469 700 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 SHMT1P34896 483 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 ATP2B2Q01814 1243 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 SLC9C2Q5TAH2 1124 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 LHX8Q68G74 356 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 SLC17A8Q8NDX2 589 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 RIOK1Q9BRS2 568 aaKnown RBP28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 UBE2OQ9C0C9 1292 aaKnown RBP28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 RPAP3Q9H6T3 665 aaPredicted RBP28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 MCM9Q9NXL9 1143 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 ALPK3Q96L96 1907 aa28.78■■■□□ 2.2
LYSMD2-202ENST00000454181 CLASRPQ8N2M8 674 aaKnown RBP28.77■■■□□ 2.2
LYSMD2-202ENST00000454181 COL6A1P12109 1028 aa28.76■■■□□ 2.19
LYSMD2-202ENST00000454181 CNGA1P29973 690 aa28.76■■■□□ 2.19
LYSMD2-202ENST00000454181 LBX2Q6XYB7 198 aa28.76■■■□□ 2.19
LYSMD2-202ENST00000454181 RHPN1Q8TCX5 695 aa28.76■■■□□ 2.19
LYSMD2-202ENST00000454181 BCL11AQ9H165 835 aa28.76■■■□□ 2.19
LYSMD2-202ENST00000454181 PDE6AP16499 860 aa28.75■■■□□ 2.19
LYSMD2-202ENST00000454181 SEPT2Q15019 361 aa28.75■■■□□ 2.19
LYSMD2-202ENST00000454181 TDHQ8IZJ6 230 aa28.75■■■□□ 2.19
LYSMD2-202ENST00000454181 PANK1Q8TE04 598 aa28.75■■■□□ 2.19
LYSMD2-202ENST00000454181 BTBD7Q9P203 1132 aa28.75■■■□□ 2.19
LYSMD2-202ENST00000454181 APBB1O00213 710 aa28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 MSCO60682 206 aa28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 IFIT2P09913 472 aaKnown RBP28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 MS4A1P11836 297 aa28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 GPR153Q6NV75 609 aa28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 DNAJC2Q99543 621 aaKnown RBP28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 HOXC10Q9NYD6 342 aa28.74■■■□□ 2.19
LYSMD2-202ENST00000454181 SPDYE16A6NNV3 312 aaPredicted RBP28.73■■■□□ 2.19
LYSMD2-202ENST00000454181 COG2Q14746 738 aa28.73■■■□□ 2.19
LYSMD2-202ENST00000454181 KIF1BPQ96EK5 621 aa28.73■■■□□ 2.19
LYSMD2-202ENST00000454181 TANGO6Q9C0B7 1094 aa28.73■■■□□ 2.19
LYSMD2-202ENST00000454181 ZNF532Q9HCE3 1301 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 GOLIM4O00461 696 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 HMMRO75330 724 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 HOXC6P09630 235 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 GUCY1A2P33402 732 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 GABPAQ06546 454 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 GRB14Q14449 540 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 LRRC26Q2I0M4 334 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 LRIT3Q3SXY7 679 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 DPP9Q86TI2 863 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 FLRT1Q9NZU1 646 aa28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 DDX20Q9UHI6 824 aaKnown RBP28.72■■■□□ 2.19
LYSMD2-202ENST00000454181 DEFB123Q8N688 67 aa28.71■■■□□ 2.19
LYSMD2-202ENST00000454181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.71■■■□□ 2.19
LYSMD2-202ENST00000454181 SENP6Q9GZR1 1112 aaPredicted RBP28.71■■■□□ 2.19
LYSMD2-202ENST00000454181 SDR42E1Q8WUS8 393 aa28.7■■■□□ 2.18
LYSMD2-202ENST00000454181 STRNO43815 780 aa28.69■■■□□ 2.18
LYSMD2-202ENST00000454181 CYP2C19P33261 490 aa28.69■■■□□ 2.18
LYSMD2-202ENST00000454181 TMEM179Q6ZVK1 233 aa28.69■■■□□ 2.18
LYSMD2-202ENST00000454181 RPAP2Q8IXW5 612 aaPredicted RBP28.69■■■□□ 2.18
LYSMD2-202ENST00000454181 NPLOC4Q8TAT6 608 aa28.69■■■□□ 2.18
LYSMD2-202ENST00000454181 LPAR1Q92633 364 aa28.69■■■□□ 2.18
LYSMD2-202ENST00000454181 LBHD1Q9BQE6 289 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms