RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 MKI67P46013 3256 aaKnown RBP19.8■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L12C9JPN9 530 aa19.8■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L21D6R901 530 aa19.8■□□□□ 0.76
NCKIPSD-208ENST00000454134 CCL5P13501 91 aa19.8■□□□□ 0.76
NCKIPSD-208ENST00000454134 C12orf42Q96LP6 360 aa19.8■□□□□ 0.76
NCKIPSD-208ENST00000454134 IRF5Q13568 498 aa19.79■□□□□ 0.76
NCKIPSD-208ENST00000454134 C12orf60Q5U649 245 aa19.79■□□□□ 0.76
NCKIPSD-208ENST00000454134 POTEEQ6S8J3 1075 aa19.79■□□□□ 0.76
NCKIPSD-208ENST00000454134 PAGR1Q9BTK6 254 aa19.79■□□□□ 0.76
NCKIPSD-208ENST00000454134 RBPJLQ9UBG7 517 aa19.79■□□□□ 0.76
NCKIPSD-208ENST00000454134 SWAP70Q9UH65 585 aa19.79■□□□□ 0.76
NCKIPSD-208ENST00000454134 A0A1W2PRG0 241 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 INHAP05111 366 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 AKR1B1P15121 316 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 VCAM1P19320 739 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP14P54578 494 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 UBXN2AP68543 259 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 PRPF38BQ5VTL8 546 aaKnown RBP19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 CLEC10AQ8IUN9 316 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 GPRC5AQ8NFJ5 357 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 OSBP2Q969R2 916 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 DDRGK1Q96HY6 314 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 STRBPQ96SI9 672 aaKnown RBP19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 RNF208Q9H0X6 261 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 UNC93B1Q9H1C4 597 aa19.78■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L15C9J2P7 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L13C9JLJ4 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L11C9JVI0 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L18D6R9N7 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L22D6RA61 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L17D6RBQ6 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L19D6RCP7 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L20D6RJB6 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 RNF113AO15541 343 aaKnown RBP19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 USP17L24Q0WX57 530 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 Q3C1V9 767 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 CTR9Q6PD62 1173 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 AMOTL1Q8IY63 956 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 PI4K2BQ8TCG2 481 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 PXYLP1Q8TE99 480 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 APPBP2Q92624 585 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 SHISA4Q96DD7 197 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 GJD2Q9UKL4 321 aa19.77■□□□□ 0.76
NCKIPSD-208ENST00000454134 TTC41PQ6P2S7 1318 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 CDK8P49336 464 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 ERVK-9P63128 1117 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 ERVK-24P63145 666 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 ANKRD45Q5TZF3 282 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 CATSPERGQ6ZRH7 1159 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 TMEM179Q6ZVK1 233 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 RPAP3Q9H6T3 665 aaPredicted RBP19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 MYH8P13535 1937 aa19.76■□□□□ 0.75
NCKIPSD-208ENST00000454134 ERC2O15083 957 aa19.75■□□□□ 0.75
NCKIPSD-208ENST00000454134 GJB1P08034 283 aa19.75■□□□□ 0.75
NCKIPSD-208ENST00000454134 C16orf86Q6ZW13 317 aa19.75■□□□□ 0.75
NCKIPSD-208ENST00000454134 PORCNQ9H237 461 aa19.75■□□□□ 0.75
NCKIPSD-208ENST00000454134 PLXNB2O15031 1838 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 GSG1L2A8MUP6 293 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 M0R2C6 588 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 GLRX3O76003 335 aaKnown RBP19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 ZFYP08048 801 aaPredicted RBP19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 MX1P20591 662 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 GJA8P48165 433 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 KIAA1755Q5JYT7 1200 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 SIAH1Q8IUQ4 282 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 STK11IPQ8N1F8 1099 aa19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 GTF3C2Q8WUA4 911 aaPredicted RBP19.74■□□□□ 0.75
NCKIPSD-208ENST00000454134 GPAA1O43292 621 aa19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 CNMDO75829 334 aa19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 CYP2B6P20813 491 aa19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 CCAR1Q8IX12 1150 aaKnown RBP19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 CCDC17Q96LX7 622 aa19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 ARPP21Q9UBL0 812 aaPredicted RBP19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
NCKIPSD-208ENST00000454134 MINDY4BA8MYZ0 360 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 MAPK4P31152 587 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 ICA1Q05084 483 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 TRIM32Q13049 653 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 HDAC1Q13547 482 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 NKX2-3Q8TAU0 364 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 U2AF1L4Q8WU68 220 aaKnown RBP19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 SEC62Q99442 399 aaKnown RBP19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 FSD1Q9BTV5 496 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 EPB41L4AQ9HCS5 686 aaPredicted RBP19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 BTBD7Q9P203 1132 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 RABGAP1Q9Y3P9 1069 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 SALL3Q9BXA9 1300 aa19.72■□□□□ 0.75
NCKIPSD-208ENST00000454134 SPDYE16A6NNV3 312 aaPredicted RBP19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 ATP2B2Q01814 1243 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 SBK1Q52WX2 424 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 GPR142Q7Z601 462 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 SPICE1Q8N0Z3 855 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 DEFB118Q96PH6 123 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 NUDT12Q9BQG2 462 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 TANGO6Q9C0B7 1094 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 ARHGEF10LQ9HCE6 1279 aa19.71■□□□□ 0.75
NCKIPSD-208ENST00000454134 SGPL1O95470 568 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 HMGCRP04035 888 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 APPP05067 770 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 LRRFIP1Q32MZ4 808 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms