RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 KRT9P35527 623 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 IFIT5Q13325 482 aaKnown RBP22.2■■□□□ 1.14
LMBR1-213ENST00000454132 KRT31Q15323 416 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 E2F4Q16254 413 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 CIAO1O76071 339 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 SYF2O95926 243 aaKnown RBP22.19■■□□□ 1.14
LMBR1-213ENST00000454132 RTN1Q16799 776 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 GOLGA6L1Q8N7Z2 621 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 IQUBQ8NA54 791 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 NAPBQ9H115 298 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 EPB41L4AQ9HCS5 686 aaPredicted RBP22.19■■□□□ 1.14
LMBR1-213ENST00000454132 ABHD10Q9NUJ1 306 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 SRPRBQ9Y5M8 271 aaKnown RBP22.19■■□□□ 1.14
LMBR1-213ENST00000454132 PBX1P40424 430 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 CUL4BQ13620 913 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 RRAGBQ5VZM2 374 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 TRIM22Q8IYM9 498 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 FAM71BQ8TC56 605 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 CNNM1Q9NRU3 951 aa22.19■■□□□ 1.14
LMBR1-213ENST00000454132 POTEB2H3BUK9 544 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 PDE6AP16499 860 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 IRX3P78415 501 aaPredicted RBP22.18■■□□□ 1.14
LMBR1-213ENST00000454132 SHISA4Q96DD7 197 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 POLD4Q9HCU8 107 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 BAZ2BQ9UIF8 2168 aaKnown RBP22.18■■□□□ 1.14
LMBR1-213ENST00000454132 PPP1R3GB7ZBB8 358 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 ZNF185O15231 689 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 MBD4O95243 580 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 ATP1A1P05023 1023 aaKnown RBP22.18■■□□□ 1.14
LMBR1-213ENST00000454132 ERCC5P28715 1186 aaPredicted RBP22.18■■□□□ 1.14
LMBR1-213ENST00000454132 RILPL1Q5EBL4 403 aa22.18■■□□□ 1.14
LMBR1-213ENST00000454132 MYBL2P10244 700 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 DNAJC21Q5F1R6 531 aaKnown RBP22.17■■□□□ 1.14
LMBR1-213ENST00000454132 CNGA4Q8IV77 575 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 TMEM87BQ96K49 555 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 EFCC1Q9HA90 598 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 PPARDQ03181 441 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 AFAP1L1Q8TED9 768 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 TTF2Q9UNY4 1162 aaKnown RBP22.17■■□□□ 1.14
LMBR1-213ENST00000454132 MAGEA9P43362 315 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 MAGEB6Q8N7X4 407 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.17■■□□□ 1.14
LMBR1-213ENST00000454132 NAA15Q9BXJ9 866 aaKnown RBP22.17■■□□□ 1.14
LMBR1-213ENST00000454132 GREM2Q9H772 168 aa22.17■■□□□ 1.14
LMBR1-213ENST00000454132 GGCXP38435 758 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 PIP4K2BP78356 416 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 IFNL3Q8IZI9 196 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 MICALL1Q8N3F8 863 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 MIGA1Q8NAN2 632 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 CCDC148Q8NFR7 591 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 REXO2Q9Y3B8 237 aaKnown RBP22.16■■□□□ 1.14
LMBR1-213ENST00000454132 JRKLQ9Y4A0 524 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 IFNAR1P17181 557 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 CDKAL1Q5VV42 579 aa22.16■■□□□ 1.14
LMBR1-213ENST00000454132 STRBPQ96SI9 672 aaKnown RBP22.16■■□□□ 1.14
LMBR1-213ENST00000454132 UBXN1Q04323 297 aa22.15■■□□□ 1.14
LMBR1-213ENST00000454132 ICE2Q659A1 982 aa22.15■■□□□ 1.14
LMBR1-213ENST00000454132 WTAPQ15007 396 aa22.15■■□□□ 1.14
LMBR1-213ENST00000454132 WHAMMP3Q1A5X7 153 aa22.15■■□□□ 1.14
LMBR1-213ENST00000454132 TRIML1Q8N9V2 468 aa22.15■■□□□ 1.14
LMBR1-213ENST00000454132 TRIM49BA6NDI0 452 aa22.14■■□□□ 1.14
LMBR1-213ENST00000454132 MFSD6Q6ZSS7 791 aa22.14■■□□□ 1.14
LMBR1-213ENST00000454132 ARHGAP23Q9P227 1491 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 ITGA6P23229 1130 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 AMPD2Q01433 879 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 TCIRG1Q13488 830 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 CTR9Q6PD62 1173 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 SGMS1Q86VZ5 419 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 CRACR2BQ8N4Y2 399 aaPredicted RBP22.14■■□□□ 1.13
LMBR1-213ENST00000454132 SPATA20Q8TB22 786 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 SMARCC1Q92922 1105 aaPredicted RBP22.14■■□□□ 1.13
LMBR1-213ENST00000454132 DUSP10Q9Y6W6 482 aa22.14■■□□□ 1.13
LMBR1-213ENST00000454132 MYO5AQ9Y4I1 1855 aaKnown RBP22.14■■□□□ 1.13
LMBR1-213ENST00000454132 TDO2P48775 406 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 LIG3P49916 1009 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 TMTC1Q8IUR5 882 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 GNL3LQ9NVN8 582 aaKnown RBP22.13■■□□□ 1.13
LMBR1-213ENST00000454132 GDAQ9Y2T3 454 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 EPN1Q9Y6I3 576 aaPredicted RBP22.13■■□□□ 1.13
LMBR1-213ENST00000454132 WDR19Q8NEZ3 1342 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 TRIM75PA6NK02 468 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 COPB1P53618 953 aaKnown RBP22.13■■□□□ 1.13
LMBR1-213ENST00000454132 KANK3Q6NY19 840 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 CYP26C1Q6V0L0 522 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 CAGE1Q8TC20 777 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 GBP3Q9H0R5 595 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 HPCAL4Q9UM19 191 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 MATR3P43243 847 aaKnown RBP eCLIP22.13■■□□□ 1.131e-6■■■■□ 21.9
LMBR1-213ENST00000454132 CCT5P48643 541 aa22.13■■□□□ 1.13
LMBR1-213ENST00000454132 FOXP1Q9H334 677 aaPredicted RBP22.13■■□□□ 1.13
LMBR1-213ENST00000454132 MINDY4BA8MYZ0 360 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 CORO7P57737 925 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 CCDC122Q5T0U0 273 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 PSMB7Q99436 277 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 IQSEC3Q9UPP2 1182 aaPredicted RBP22.12■■□□□ 1.13
LMBR1-213ENST00000454132 TBC1D2BQ9UPU7 963 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 C2orf54Q08AI8 447 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 WASF1Q92558 559 aa22.12■■□□□ 1.13
LMBR1-213ENST00000454132 CTAGE1Q96RT6 745 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms