RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 MCM6Q14566 821 aa17.87■□□□□ 0.45
TRA2B-205ENST00000453386 APTXQ7Z2E3 356 aaKnown RBP17.87■□□□□ 0.45
TRA2B-205ENST00000453386 SYMPKQ92797 1274 aaKnown RBP17.87■□□□□ 0.45
TRA2B-205ENST00000453386 NAA15Q9BXJ9 866 aaKnown RBP17.87■□□□□ 0.45
TRA2B-205ENST00000453386 XBP1P17861 261 aa17.87■□□□□ 0.45
TRA2B-205ENST00000453386 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
TRA2B-205ENST00000453386 CDC23Q9UJX2 597 aa17.87■□□□□ 0.45
TRA2B-205ENST00000453386 PRDM1O75626 825 aa17.86■□□□□ 0.45
TRA2B-205ENST00000453386 CCT6AP40227 531 aaKnown RBP17.86■□□□□ 0.45
TRA2B-205ENST00000453386 BRD3Q15059 726 aa17.86■□□□□ 0.45
TRA2B-205ENST00000453386 AATFQ9NY61 560 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRA2B-205ENST00000453386 MYO5AQ9Y4I1 1855 aaKnown RBP17.86■□□□□ 0.45
TRA2B-205ENST00000453386 FGFR2P21802 821 aa17.86■□□□□ 0.45
TRA2B-205ENST00000453386 EARS2Q5JPH6 523 aaKnown RBP17.86■□□□□ 0.45
TRA2B-205ENST00000453386 CTAGE1Q96RT6 745 aa17.86■□□□□ 0.45
TRA2B-205ENST00000453386 LRP2BPQ9P2M1 347 aa17.86■□□□□ 0.45
TRA2B-205ENST00000453386 MROH5Q6ZUA9 1318 aa17.86■□□□□ 0.45
TRA2B-205ENST00000453386 MFAP3LO75121 409 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 CUL4BQ13620 913 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 CEP112Q8N8E3 955 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 CARD10Q9BWT7 1032 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
TRA2B-205ENST00000453386 PARP4Q9UKK3 1724 aaKnown RBP17.85■□□□□ 0.45
TRA2B-205ENST00000453386 UBR2Q8IWV8 1755 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 GNAT2P19087 354 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 BCAMP50895 628 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 ZNF174Q15697 407 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 CTAGE9A4FU28 777 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 ACRBPQ8NEB7 543 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 CTNND2Q9UQB3 1225 aa17.85■□□□□ 0.45
TRA2B-205ENST00000453386 H3BQF6 201 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 TFRCP02786 760 aaKnown RBP17.84■□□□□ 0.45
TRA2B-205ENST00000453386 KRT2P35908 639 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 LMAN1P49257 510 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 FXR1P51114 621 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRA2B-205ENST00000453386 CNGA4Q8IV77 575 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 AK7Q96M32 723 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 CDC5LQ99459 802 aaKnown RBP17.84■□□□□ 0.45
TRA2B-205ENST00000453386 ANKZF1Q9H8Y5 726 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 TMEM51Q9NW97 253 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 ADAM21Q9UKJ8 722 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 V9GY48 417 aaPredicted RBP17.84■□□□□ 0.45
TRA2B-205ENST00000453386 TNKSO95271 1327 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 RHOXF2BP0C7M4 288 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 PPARAQ07869 468 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 CDKAL1Q5VV42 579 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 RASGRP2Q7LDG7 609 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 SLC35F6Q8N357 371 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 GSDMAQ96QA5 445 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 RHOXF2Q9BQY4 288 aa17.84■□□□□ 0.45
TRA2B-205ENST00000453386 N4BP3O15049 544 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 GYPCP04921 128 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 PBX1P40424 430 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 DPYDQ12882 1025 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 SDR42E1Q8WUS8 393 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.45
TRA2B-205ENST00000453386 BLZF1Q9H2G9 400 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.45
TRA2B-205ENST00000453386 ZBTB1Q9Y2K1 713 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 NID2Q14112 1375 aa17.83■□□□□ 0.45
TRA2B-205ENST00000453386 PPP1R3GB7ZBB8 358 aa17.83■□□□□ 0.44
TRA2B-205ENST00000453386 CT47A1Q5JQC4 288 aaPredicted RBP17.83■□□□□ 0.44
TRA2B-205ENST00000453386 PNKPQ96T60 521 aa17.83■□□□□ 0.44
TRA2B-205ENST00000453386 VPS16Q9H269 839 aa17.83■□□□□ 0.44
TRA2B-205ENST00000453386 PDE11AQ9HCR9 933 aa17.83■□□□□ 0.44
TRA2B-205ENST00000453386 ECM29Q5VYK3 1845 aa17.83■□□□□ 0.44
TRA2B-205ENST00000453386 SMIM22K7EJ46 135 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 WNT7AO00755 349 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 ABL1P00519 1130 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
TRA2B-205ENST00000453386 RRAGBQ5VZM2 374 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 SH3RF1Q7Z6J0 888 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 ESR2Q92731 530 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 TTF2Q9UNY4 1162 aaKnown RBP17.82■□□□□ 0.44
TRA2B-205ENST00000453386 MAP2K7O14733 419 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 ERLIN1O75477 346 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 CYP7A1P22680 504 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 CDC25AP30304 524 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 ZSCAN26Q16670 478 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 BEND6Q5SZJ8 279 aaPredicted RBP17.82■□□□□ 0.44
TRA2B-205ENST00000453386 HDXQ7Z353 690 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 BBXQ8WY36 941 aaPredicted RBP17.82■□□□□ 0.44
TRA2B-205ENST00000453386 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 ABCF2Q9UG63 623 aa17.82■□□□□ 0.44
TRA2B-205ENST00000453386 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 POTEB2H3BUK9 544 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 RAD51AP2Q09MP3 1159 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 PKN1Q16512 942 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 NOM1Q5C9Z4 860 aaKnown RBP17.81■□□□□ 0.44
TRA2B-205ENST00000453386 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
TRA2B-205ENST00000453386 PHF20Q9BVI0 1012 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 VPS18Q9P253 973 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 KRT31Q15323 416 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 BRMS1Q9HCU9 246 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 ABCB6Q9NP58 842 aa17.81■□□□□ 0.44
TRA2B-205ENST00000453386 TULP2O00295 520 aa17.8■□□□□ 0.44
TRA2B-205ENST00000453386 PLEKHA8P1O95397 391 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms