RNA–Protein interactions for RNA: ENST00000452564.1

PIKFYVE-207, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 2

Gene PIKFYVE, Length 4,214 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-207ENST00000452564 GPRC5AQ8NFJ5 357 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 SSH3Q8TE77 659 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 KATNBL1Q9H079 304 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 PI4KBQ9UBF8 816 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 CHMP3Q9Y3E7 222 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 TRIM75PA6NK02 468 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 FGD4Q96M96 766 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 MEIS3Q99687 375 aa8.39□□□□□ -1.07
PIKFYVE-207ENST00000452564 FRAT2O75474 233 aaPredicted RBP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 CDK7P50613 346 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 SPP2Q13103 211 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 PABPC4Q13310 644 aaKnown RBP eCLIP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 MTMR2Q13614 643 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 KLHDC9Q8NEP7 349 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 CDX2Q99626 313 aaPredicted RBP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 LRRFIP2Q9Y608 721 aaKnown RBP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 KMT2EQ8IZD2 1858 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 TRIOBPQ9H2D6 2365 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 EPHB4P54760 987 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L2Q6R6M4 530 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 UPF3AQ9H1J1 476 aaKnown RBP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 RGS2P41220 211 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 RARSP54136 660 aaKnown RBP8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 TIMM10P62072 90 aa8.38□□□□□ -1.07
PIKFYVE-207ENST00000452564 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 ADAMTS4O75173 837 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 MVPQ14764 893 aaKnown RBP8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 PLEKHH3Q7Z736 793 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 AS3MTQ9HBK9 375 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 DNAJC25-GNG10A0A024R161 153 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 CST5P28325 142 aaPredicted RBP8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 GSTO1P78417 241 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 GNL3LQ9NVN8 582 aaKnown RBP8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 PNMA6EA0A0J9YXQ4 647 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 ASNSP08243 561 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 ZNF792Q3KQV3 632 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 C9orf50Q5SZB4 431 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 C16orf59Q7L2K0 433 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 PIH1D3Q9NQM4 214 aaKnown RBP8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 ZMYND8Q9ULU4 1186 aaPredicted RBP8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 MSCO60682 206 aa8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.37□□□□□ -1.07
PIKFYVE-207ENST00000452564 COBLO75128 1261 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 ZNF865P0CJ78 1059 aaPredicted RBP8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 SCN10AQ9Y5Y9 1956 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 A0A1W2PRG0 241 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 SHHQ15465 462 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 CEP126Q9P2H0 1117 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 NOB1Q9ULX3 412 aaKnown RBP8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 VCAM1P19320 739 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 TPRNQ4KMQ1 711 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 SLC4A10Q6U841 1118 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 MAMDC4Q6UXC1 1216 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 TOX2Q96NM4 488 aa8.36□□□□□ -1.07
PIKFYVE-207ENST00000452564 SYN1P17600 705 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 UBE2OQ9C0C9 1292 aaKnown RBP8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 MCM3APO60318 1980 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 RTP1P59025 263 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 EVX2Q03828 476 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 SMCHD1A6NHR9 2005 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 KIAA1217Q5T5P2 1943 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 IGKV6D-41A0A0C4DH26 115 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 ATP2A1O14983 1001 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 MYCP01106 439 aaPredicted RBP8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP38Q8NB14 1042 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 SCN5AQ14524 2016 aa8.35□□□□□ -1.07
PIKFYVE-207ENST00000452564 CD4P01730 458 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 NOVP48745 357 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 TNNI3KQ59H18 835 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 AKNAD1Q5T1N1 836 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 SH3RF1Q7Z6J0 888 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 CERS3Q8IU89 383 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 FPGT-TNNI3KV9GXZ4 949 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 KIAA1671Q9BY89 1806 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 SEPT4O43236 478 aa8.34□□□□□ -1.07
PIKFYVE-207ENST00000452564 UBTFL1P0CB47 393 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms