RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 C12orf42Q96LP6 360 aa22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 CABP5Q9NP86 173 aa22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 MCM9Q9NXL9 1143 aa22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 CHRDL2Q6WN34 429 aa22.23■■□□□ 1.15
PDLIM2-214ENST00000452226 ACER1Q8TDN7 264 aa22.23■■□□□ 1.15
PDLIM2-214ENST00000452226 PAGR1Q9BTK6 254 aa22.23■■□□□ 1.15
PDLIM2-214ENST00000452226 PAG1Q9NWQ8 432 aa22.23■■□□□ 1.15
PDLIM2-214ENST00000452226 MYH7P12883 1935 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 ATP5JP18859 108 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 USP14P54578 494 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 ERVK-9P63128 1117 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 ERVK-24P63145 666 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 GABPAQ06546 454 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 Q3C1V9 767 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 CCAR1Q8IX12 1150 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 LCORLQ8N3X6 602 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 SDR42E1Q8WUS8 393 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 KIAA1683Q9H0B3 1180 aa22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.22■■□□□ 1.15
PDLIM2-214ENST00000452226 MYH8P13535 1937 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 BAZ2AQ9UIF9 1905 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L15C9J2P7 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L13C9JLJ4 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L11C9JVI0 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L18D6R9N7 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L22D6RA61 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L17D6RBQ6 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L19D6RCP7 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L20D6RJB6 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 CYP2B6P20813 491 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 MAPK4P31152 587 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 EVX2Q03828 476 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 USP17L24Q0WX57 530 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 HDAC1Q13547 482 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 POTEEQ6S8J3 1075 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 NUDT12Q9BQG2 462 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 CRISPLD2Q9H0B8 497 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 ARMT1Q9H993 441 aa22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 DCP1AQ9NPI6 582 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-214ENST00000452226 ADD2P35612 726 aa22.2■■□□□ 1.14
PDLIM2-214ENST00000452226 TRIM32Q13049 653 aa22.2■■□□□ 1.14
PDLIM2-214ENST00000452226 SOCS4Q8WXH5 440 aa22.2■■□□□ 1.14
PDLIM2-214ENST00000452226 HAUS7Q99871 368 aa22.2■■□□□ 1.14
PDLIM2-214ENST00000452226 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.14
PDLIM2-214ENST00000452226 PORCNQ9H237 461 aa22.2■■□□□ 1.14
PDLIM2-214ENST00000452226 MPHOSPH10O00566 681 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 VCAM1P19320 739 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 GUCY1A2P33402 732 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 SEPT2Q15019 361 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 SLFNL1Q499Z3 407 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 CATSPERGQ6ZRH7 1159 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 EXOC6Q8TAG9 804 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 TRIB2Q92519 343 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 HMX1Q9NP08 348 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 RPTORQ8N122 1335 aa22.19■■□□□ 1.14
PDLIM2-214ENST00000452226 MBD4O95243 580 aa22.18■■□□□ 1.14
PDLIM2-214ENST00000452226 CYP2D6P10635 497 aa22.18■■□□□ 1.14
PDLIM2-214ENST00000452226 XRCC5P13010 732 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-214ENST00000452226 GPR142Q7Z601 462 aa22.18■■□□□ 1.14
PDLIM2-214ENST00000452226 PLEKHH3Q7Z736 793 aa22.18■■□□□ 1.14
PDLIM2-214ENST00000452226 PRKAB2O43741 272 aa22.17■■□□□ 1.14
PDLIM2-214ENST00000452226 EVI5O60447 810 aa22.17■■□□□ 1.14
PDLIM2-214ENST00000452226 SLC44A5Q8NCS7 719 aa22.17■■□□□ 1.14
PDLIM2-214ENST00000452226 RANBP2P49792 3224 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 CNMDO75829 334 aa22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 CCNA1P78396 465 aa22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 USP6NLQ92738 828 aa22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 PAWRQ96IZ0 340 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 RPAP3Q9H6T3 665 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 CWC22Q9HCG8 908 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 ATP8A2Q9NTI2 1148 aa22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 ECHDC1Q9NTX5 307 aa22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 RBM27Q9P2N5 1060 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-214ENST00000452226 CHGBP05060 677 aa22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 PRKAR2AP13861 404 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 RGS2P41220 211 aa22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 MORN1Q5T089 497 aa22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 NECAB2Q7Z6G3 386 aa22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 TRMT44Q8IYL2 757 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 DYNLL2Q96FJ2 89 aa22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 SWAP70Q9UH65 585 aa22.15■■□□□ 1.14
PDLIM2-214ENST00000452226 ALPK3Q96L96 1907 aa22.14■■□□□ 1.14
PDLIM2-214ENST00000452226 A0A1W2PRG0 241 aa22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 ZKSCAN1P17029 563 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 UBE3CQ15386 1083 aa22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 MAP3K21Q5TCX8 1036 aa22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 LBX2Q6XYB7 198 aa22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 TMEM179Q6ZVK1 233 aa22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 ANKLE1Q8NAG6 615 aa22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 DIS3LQ8TF46 1054 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-214ENST00000452226 SPDYE16A6NNV3 312 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-214ENST00000452226 GLRX3O76003 335 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-214ENST00000452226 CCL14Q16627 93 aa22.13■■□□□ 1.13
PDLIM2-214ENST00000452226 WDR78Q5VTH9 848 aa22.13■■□□□ 1.13
PDLIM2-214ENST00000452226 ZSCAN25Q6NSZ9 544 aa22.13■■□□□ 1.13
PDLIM2-214ENST00000452226 APBA2Q99767 749 aa22.13■■□□□ 1.13
PDLIM2-214ENST00000452226 BTBD7Q9P203 1132 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms