RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 KIAA1683Q9H0B3 1180 aa17.1■□□□□ 0.33
COL3A1-203ENST00000450867 AGTPBP1Q9UPW5 1226 aa17.1■□□□□ 0.33
COL3A1-203ENST00000450867 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
COL3A1-203ENST00000450867 ORC4O43929 436 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 SLC3A2P08195 630 aaKnown RBP17.09■□□□□ 0.33
COL3A1-203ENST00000450867 HMGCS2P54868 508 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 PDE4BQ07343 736 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 CRHR2Q13324 411 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 MTMR2Q13614 643 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 RAB3GAP1Q15042 981 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
COL3A1-203ENST00000450867 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL3A1-203ENST00000450867 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
COL3A1-203ENST00000450867 MGAMO43451 1857 aa17.08■□□□□ 0.33
COL3A1-203ENST00000450867 IGKV6D-41A0A0C4DH26 115 aa17.08■□□□□ 0.32
COL3A1-203ENST00000450867 PDHXO00330 501 aa17.08■□□□□ 0.32
COL3A1-203ENST00000450867 TBC1D8O95759 1140 aa17.08■□□□□ 0.32
COL3A1-203ENST00000450867 PCP11498 1178 aaKnown RBP17.08■□□□□ 0.32
COL3A1-203ENST00000450867 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
COL3A1-203ENST00000450867 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.32
COL3A1-203ENST00000450867 GPR25O00155 361 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 MPHOSPH10O00566 681 aaKnown RBP17.07■□□□□ 0.32
COL3A1-203ENST00000450867 TLR2O60603 784 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 HOXA7P31268 230 aaPredicted RBP17.07■□□□□ 0.32
COL3A1-203ENST00000450867 NT5C2P49902 561 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 USP14P54578 494 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 ACER1Q8TDN7 264 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 KANSL2Q9H9L4 492 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 TACC3Q9Y6A5 838 aa17.07■□□□□ 0.32
COL3A1-203ENST00000450867 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 ICA1Q05084 483 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 USP17L2Q6R6M4 530 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 PARK7Q99497 189 aaKnown RBP17.06■□□□□ 0.32
COL3A1-203ENST00000450867 TMX2Q9Y320 296 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
COL3A1-203ENST00000450867 PRDM1O75626 825 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 PABPC4Q13310 644 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL3A1-203ENST00000450867 DGKZQ13574 1117 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
COL3A1-203ENST00000450867 ZNF296Q8WUU4 475 aaPredicted RBP17.05■□□□□ 0.32
COL3A1-203ENST00000450867 STAG1Q8WVM7 1258 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 NYAP2Q9P242 653 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 CTNNA3Q9UI47 895 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 SYNPO2Q9UMS6 1093 aa17.05■□□□□ 0.32
COL3A1-203ENST00000450867 FKTNO75072 461 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 C17orf99Q6UX52 265 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 FEZ1Q99689 392 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 PNMA3Q9UL41 463 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 ZSWIM8A7E2V4 1837 aa17.04■□□□□ 0.32
COL3A1-203ENST00000450867 CDC45O75419 566 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 BCRP11274 1271 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 EEF2P13639 858 aaKnown RBP17.03■□□□□ 0.32
COL3A1-203ENST00000450867 NOVP48745 357 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 PTH1RQ03431 593 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 AKNAD1Q5T1N1 836 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 TBC1D10CQ8IV04 446 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 LPAR1Q92633 364 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 MAP4K1Q92918 833 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 MKL1Q969V6 931 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 RNF41Q9H4P4 317 aaPredicted RBP17.03■□□□□ 0.32
COL3A1-203ENST00000450867 MTMR4Q9NYA4 1195 aa17.03■□□□□ 0.32
COL3A1-203ENST00000450867 ZNF213O14771 459 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 CYP2C8P10632 490 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 VCAM1P19320 739 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 HAND2P61296 217 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 ASCC2Q9H1I8 757 aaPredicted RBP17.02■□□□□ 0.32
COL3A1-203ENST00000450867 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 INCENPQ9NQS7 918 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
COL3A1-203ENST00000450867 DOCK3Q8IZD9 2030 aa17.02■□□□□ 0.32
COL3A1-203ENST00000450867 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 TFAP4Q01664 338 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 SP3Q02447 781 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 IMMTQ16891 758 aaKnown RBP17.01■□□□□ 0.31
COL3A1-203ENST00000450867 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 COL13A1Q5TAT6 717 aaPredicted RBP17.01■□□□□ 0.31
COL3A1-203ENST00000450867 MFSD6Q6ZSS7 791 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
COL3A1-203ENST00000450867 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
COL3A1-203ENST00000450867 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
COL3A1-203ENST00000450867 USP17L15C9J2P7 530 aa17■□□□□ 0.31
COL3A1-203ENST00000450867 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
COL3A1-203ENST00000450867 USP17L11C9JVI0 530 aa17■□□□□ 0.31
COL3A1-203ENST00000450867 USP17L18D6R9N7 530 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms