RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 HERC5Q9UII4 1024 aaKnown RBP12.44□□□□□ -0.42
LINC01004-202ENST00000450686 BAG3O95817 575 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 GH2P01242 217 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 SYN1P17600 705 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 PPP4CP60510 307 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 HERVK_113P62684 666 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 ATP8B2P98198 1209 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 Q3C1V9 767 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 WDR18Q9BV38 432 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 TMOD4Q9NZQ9 345 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
LINC01004-202ENST00000450686 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
LINC01004-202ENST00000450686 MAP4K4O95819 1239 aaPredicted RBP12.42□□□□□ -0.42
LINC01004-202ENST00000450686 ASNSP08243 561 aa12.42□□□□□ -0.42
LINC01004-202ENST00000450686 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
LINC01004-202ENST00000450686 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC01004-202ENST00000450686 GPR108Q9NPR9 543 aa12.42□□□□□ -0.42
LINC01004-202ENST00000450686 RBPJLQ9UBG7 517 aa12.42□□□□□ -0.42
LINC01004-202ENST00000450686 MORF4L1Q9UBU8 362 aa12.42□□□□□ -0.42
LINC01004-202ENST00000450686 FRMPD3Q5JV73 1810 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 USP17L10C9JJH3 530 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 APBB1O00213 710 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 CCND3P30281 292 aaPredicted RBP12.41□□□□□ -0.42
LINC01004-202ENST00000450686 USP5P45974 858 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC01004-202ENST00000450686 NECAB2Q7Z6G3 386 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
LINC01004-202ENST00000450686 FTSJ3Q8IY81 847 aaKnown RBP12.41□□□□□ -0.42
LINC01004-202ENST00000450686 ACER1Q8TDN7 264 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
LINC01004-202ENST00000450686 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
LINC01004-202ENST00000450686 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 CNMDO75829 334 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 PLCG2P16885 1265 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 HOXA7P31268 230 aaPredicted RBP12.4□□□□□ -0.42
LINC01004-202ENST00000450686 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 ERVK-24P63145 666 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 GPRC5AQ8NFJ5 357 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 HMX1Q9NP08 348 aaPredicted RBP12.4□□□□□ -0.42
LINC01004-202ENST00000450686 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
LINC01004-202ENST00000450686 PFASO15067 1338 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 HLA-DOAP06340 250 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 PLCD1P51178 756 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 CACNB2Q08289 660 aaPredicted RBP12.39□□□□□ -0.43
LINC01004-202ENST00000450686 MAP3K21Q5TCX8 1036 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 WDR78Q5VTH9 848 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 GPR142Q7Z601 462 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 AACSQ86V21 672 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
LINC01004-202ENST00000450686 FEZ1Q99689 392 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 NUDT12Q9BQG2 462 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 FLRT1Q9NZU1 646 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
LINC01004-202ENST00000450686 CUL9Q8IWT3 2517 aa12.39□□□□□ -0.43
LINC01004-202ENST00000450686 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 CYP2D6P10635 497 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
LINC01004-202ENST00000450686 SHMT1P34896 483 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 Q7L0L9 218 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 CLEC10AQ8IUN9 316 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 USP6NLQ92738 828 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 EDC3Q96F86 508 aaKnown RBP12.38□□□□□ -0.43
LINC01004-202ENST00000450686 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
LINC01004-202ENST00000450686 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 C11orf49Q9H6J7 331 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 OGDHLQ9ULD0 1010 aa12.38□□□□□ -0.43
LINC01004-202ENST00000450686 BAZ2AQ9UIF9 1905 aaKnown RBP12.37□□□□□ -0.43
LINC01004-202ENST00000450686 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 CHGBP05060 677 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 VCAM1P19320 739 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 MAGEA10P43363 369 aaPredicted RBP12.37□□□□□ -0.43
LINC01004-202ENST00000450686 PDE3AQ14432 1141 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 MORN1Q5T089 497 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 CCAR1Q8IX12 1150 aaKnown RBP12.37□□□□□ -0.43
LINC01004-202ENST00000450686 SLC44A5Q8NCS7 719 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 GDF15Q99988 308 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 CWC22Q9HCG8 908 aaKnown RBP12.37□□□□□ -0.43
LINC01004-202ENST00000450686 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
LINC01004-202ENST00000450686 UNC80Q8N2C7 3258 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
LINC01004-202ENST00000450686 MAPK4P31152 587 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 SEPT2Q15019 361 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 LRRC26Q2I0M4 334 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 ABCB5Q2M3G0 1257 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 CERKLQ49MI3 558 aaPredicted RBP12.36□□□□□ -0.43
LINC01004-202ENST00000450686 TATDN1Q6P1N9 297 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 ANKLE1Q8NAG6 615 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms