RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 LRWD1Q9UFC0 647 aa11.99□□□□□ -0.49
SCN5A-208ENST00000450102 CSADQ9Y600 493 aa11.99□□□□□ -0.49
SCN5A-208ENST00000450102 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
SCN5A-208ENST00000450102 FLOT1O75955 427 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 ATF7P17544 494 aaPredicted RBP11.98□□□□□ -0.49
SCN5A-208ENST00000450102 IRX4P78413 519 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 PDZD4Q76G19 769 aaPredicted RBP11.98□□□□□ -0.49
SCN5A-208ENST00000450102 PSMB7Q99436 277 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 ANAPC5Q9UJX4 755 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 CALCRLQ16602 461 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
SCN5A-208ENST00000450102 RAB20Q9NX57 234 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 TTC41PQ6P2S7 1318 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 STAM2O75886 525 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 PDE6AP16499 860 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 MX2P20592 715 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 ZNF449Q6P9G9 518 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 CABS1Q96KC9 395 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 IPO11Q9UI26 975 aaKnown RBP11.98□□□□□ -0.49
SCN5A-208ENST00000450102 STK38LQ9Y2H1 464 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 ANGPTL3Q9Y5C1 460 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 PPFIA1Q13136 1202 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 SUPT20HQ8NEM7 779 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 ITM2BQ9Y287 266 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 SORBS3O60504 671 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 IFNB1P01574 187 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 PHEXP78562 749 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 LONRF3Q496Y0 759 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 FAM102BQ5T8I3 360 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 TPH2Q8IWU9 490 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 NIM1KQ8IY84 436 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 NME8Q8N427 588 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 SPDL1Q96EA4 605 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 RASSF4Q9H2L5 321 aa11.98□□□□□ -0.49
SCN5A-208ENST00000450102 MRPL46Q9H2W6 279 aaKnown RBP11.98□□□□□ -0.49
SCN5A-208ENST00000450102 XAB2Q9HCS7 855 aaKnown RBP11.98□□□□□ -0.49
SCN5A-208ENST00000450102 PHBP35232 272 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 MAGEA1P43355 309 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 CABLES1Q8TDN4 633 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 HAUS1Q96CS2 278 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 H7C1D1 291 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 CSPG5O95196 566 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 GPR162Q16538 588 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 LONRF2Q1L5Z9 754 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 RNF217Q8TC41 542 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 CCNL1Q9UK58 526 aaPredicted RBP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 STX2P32856 288 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 RASSF2P50749 326 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 HADHQ16836 314 aaKnown RBP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 MMEL1Q495T6 779 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 SFMBT2Q5VUG0 894 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 ZBTB8OSQ8IWT0 167 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 AATFQ9NY61 560 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 FAM8A1Q9UBU6 413 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 RNF40O75150 1001 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 BAG2O95816 211 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 TNNC2P02585 160 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 PAK2Q13177 524 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 MTMR3Q13615 1198 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCN5A-208ENST00000450102 TTC38Q5R3I4 469 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 POTEDQ86YR6 584 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 ADPGKQ9BRR6 497 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 RIC8AQ9NPQ8 531 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 PARP2Q9UGN5 583 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 ARHGEF16Q5VV41 709 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 LINS1Q8NG48 757 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 GBP5Q96PP8 586 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 HELLSQ9NRZ9 838 aa11.97□□□□□ -0.49
SCN5A-208ENST00000450102 TYW5A2RUC4 315 aaKnown RBP11.96□□□□□ -0.49
SCN5A-208ENST00000450102 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 KCNH3Q9ULD8 1083 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 SYNJ2BP-COX16A0A087WUM0 186 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 OPHN1O60890 802 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 IGHDP01880 384 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 U2AF2P26368 475 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCN5A-208ENST00000450102 GNPTABQ3T906 1256 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 MIER3Q7Z3K6 550 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 KRT25Q7Z3Z0 450 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 COX16Q9P0S2 106 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 ZKSCAN5Q9Y2L8 839 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.49
SCN5A-208ENST00000450102 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
SCN5A-208ENST00000450102 ANKRD44Q8N8A2 993 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 PNMA2Q9UL42 364 aa11.96□□□□□ -0.49
SCN5A-208ENST00000450102 MUM1Q2TAK8 710 aa11.96□□□□□ -0.5
SCN5A-208ENST00000450102 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.5
SCN5A-208ENST00000450102 POLKQ9UBT6 870 aa11.96□□□□□ -0.5
SCN5A-208ENST00000450102 IL16Q14005 1332 aa11.96□□□□□ -0.5
SCN5A-208ENST00000450102 EHBP1L1Q8N3D4 1523 aa11.96□□□□□ -0.5
SCN5A-208ENST00000450102 IGSF3O75054 1194 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms