RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 KAT14Q9H8E8 782 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 ZNF646O15015 1829 aaPredicted RBP20.48■□□□□ 0.87
LMNA-208ENST00000448611 BTBD18B2RXH4 712 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 SPTLC2O15270 562 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 AKAP17AQ02040 695 aaKnown RBP20.48■□□□□ 0.87
LMNA-208ENST00000448611 CAMK4Q16566 473 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 MAP3K11Q16584 847 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 ADALQ6DHV7 355 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 RBM43Q6ZSC3 357 aaKnown RBP20.48■□□□□ 0.87
LMNA-208ENST00000448611 NOSTRINQ8IVI9 506 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 DIS3L2Q8IYB7 885 aaKnown RBP20.48■□□□□ 0.87
LMNA-208ENST00000448611 SRBD1Q8N5C6 995 aaKnown RBP20.48■□□□□ 0.87
LMNA-208ENST00000448611 RNF214Q8ND24 703 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 TEKT1Q969V4 418 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 SHISA4Q96DD7 197 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 FOXP1Q9H334 677 aaPredicted RBP20.48■□□□□ 0.87
LMNA-208ENST00000448611 CNTNAP5Q8WYK1 1306 aa20.48■□□□□ 0.87
LMNA-208ENST00000448611 A0A1W2PQ27 194 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 A0A1W2PQ64 194 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 A0A1W2PQD8 194 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 SAFBQ15424 915 aaKnown RBP eCLIP20.47■□□□□ 0.87
LMNA-208ENST00000448611 APOBEC3HQ6NTF7 200 aaKnown RBP20.47■□□□□ 0.87
LMNA-208ENST00000448611 MAP3K14Q99558 947 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 DDX4Q9NQI0 724 aaKnown RBP20.47■□□□□ 0.87
LMNA-208ENST00000448611 USP40Q9NVE5 1235 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
LMNA-208ENST00000448611 ADAMTSL1Q8N6G6 1762 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 KIAA2012Q0VF49 1180 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 SNW1Q13573 536 aaKnown RBP20.47■□□□□ 0.87
LMNA-208ENST00000448611 SLC39A14Q15043 492 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 ENGASEQ8NFI3 743 aa20.47■□□□□ 0.87
LMNA-208ENST00000448611 MYH6P13533 1939 aa20.46■□□□□ 0.87
LMNA-208ENST00000448611 PICALMQ13492 652 aa20.46■□□□□ 0.87
LMNA-208ENST00000448611 SF3A1Q15459 793 aaKnown RBP20.46■□□□□ 0.87
LMNA-208ENST00000448611 CDC42EP5Q6NZY7 148 aa20.46■□□□□ 0.87
LMNA-208ENST00000448611 NEDD1Q8NHV4 660 aa20.46■□□□□ 0.87
LMNA-208ENST00000448611 MRIQ9BWK5 157 aa20.46■□□□□ 0.87
LMNA-208ENST00000448611 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 KIF5BP33176 963 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 CRKP46108 304 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 PTPAQ15257 358 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 AOC3Q16853 763 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 PPP1R9BQ96SB3 815 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 C21orf2O43822 256 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 FAM160A1Q05DH4 1040 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 GABPAQ06546 454 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 CCDC173Q0VFZ6 552 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 GRM4Q14833 912 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 CCDC73Q6ZRK6 1079 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 FSIP1Q8NA03 581 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 MRPS27Q92552 414 aaKnown RBP20.45■□□□□ 0.86
LMNA-208ENST00000448611 ANP32BQ92688 251 aaKnown RBP20.45■□□□□ 0.86
LMNA-208ENST00000448611 ZDHHC15Q96MV8 337 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 TMEM47Q9BQJ4 181 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 PHF20Q9BVI0 1012 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 VPS54Q9P1Q0 977 aa20.45■□□□□ 0.86
LMNA-208ENST00000448611 XBP1P17861 261 aa20.44■□□□□ 0.86
LMNA-208ENST00000448611 AXDND1Q5T1B0 1012 aaPredicted RBP20.44■□□□□ 0.86
LMNA-208ENST00000448611 CCDC192P0DO97 292 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 NOVP48745 357 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 HDLBPQ00341 1268 aaKnown RBP20.43■□□□□ 0.86
LMNA-208ENST00000448611 NR5A1Q13285 461 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 OXER1Q8TDS5 423 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
LMNA-208ENST00000448611 STX8Q9UNK0 236 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 PPP6R2O75170 966 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 TOB1P50616 345 aaPredicted RBP20.43■□□□□ 0.86
LMNA-208ENST00000448611 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 CKAP2LQ8IYA6 745 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 TTLL6Q8N841 843 aa20.43■□□□□ 0.86
LMNA-208ENST00000448611 PLIN4Q96Q06 1357 aa20.42■□□□□ 0.86
LMNA-208ENST00000448611 KCNA3P22001 575 aa20.42■□□□□ 0.86
LMNA-208ENST00000448611 FMR1NBQ8N0W7 255 aaPredicted RBP20.42■□□□□ 0.86
LMNA-208ENST00000448611 MAD2L2Q9UI95 211 aa20.42■□□□□ 0.86
LMNA-208ENST00000448611 CD2APQ9Y5K6 639 aa20.42■□□□□ 0.86
LMNA-208ENST00000448611 RILPL1Q5EBL4 403 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.41■□□□□ 0.86
LMNA-208ENST00000448611 KIF13BQ9NQT8 1826 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 SCG2P13521 617 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 MARCKSP29966 332 aaPredicted RBP20.41■□□□□ 0.86
LMNA-208ENST00000448611 TGFB2P61812 414 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 TYRO3Q06418 890 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 NFIAQ12857 509 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 NPY5RQ15761 445 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 PFKFB3Q16875 520 aaPredicted RBP20.41■□□□□ 0.86
LMNA-208ENST00000448611 UVSSAQ2YD98 709 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 PCDHAC2Q9Y5I4 1007 aa20.41■□□□□ 0.86
LMNA-208ENST00000448611 A0A1B0GVL5 298 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 YDJCA8MPS7 323 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 CTAGE5O15320 804 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 PPIP5K2O43314 1243 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 DPEP1P16444 411 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 CMA1P23946 247 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms