RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PDHXO00330 501 aa16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 PRDM1O75626 825 aa16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 RASA1P20936 1047 aa16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 USP14P54578 494 aa16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 MCOLN1Q9GZU1 580 aa16.65■□□□□ 0.26
GTF3C3-206ENST00000448539 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 CCDC85CA6NKD9 419 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 ZNF213O14771 459 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 HAND2P61296 217 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 ICA1Q05084 483 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 PABPC4Q13310 644 aaKnown RBP eCLIP16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 DGKZQ13574 1117 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 CFHR5Q9BXR6 569 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 ARHGEF10LQ9HCE6 1279 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 ANAPC4Q9UJX5 808 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
GTF3C3-206ENST00000448539 SGSM2O43147 1006 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 CDC45O75419 566 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 TSPY3P0CV98 308 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 TSPY8P0CW00 308 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 CRHR2Q13324 411 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 MOGSQ13724 837 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 PARK7Q99497 189 aaKnown RBP16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 IL25Q9H293 177 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 PNMA3Q9UL41 463 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 SLC45A1Q9Y2W3 748 aa16.63■□□□□ 0.25
GTF3C3-206ENST00000448539 TSPY2A6NKD2 308 aa16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 OSBPP22059 807 aa16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 KIAA1683Q9H0B3 1180 aa16.62■□□□□ 0.25
GTF3C3-206ENST00000448539 LAMB1P07942 1786 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 GPR25O00155 361 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 PCP11498 1178 aaKnown RBP16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 TFAP4Q01664 338 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
GTF3C3-206ENST00000448539 ORC4O43929 436 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 IRX3P78415 501 aaPredicted RBP16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 NOM1Q5C9Z4 860 aaKnown RBP16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 R3HDMLQ9H3Y0 253 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 MYH8P13535 1937 aa16.6■□□□□ 0.25
GTF3C3-206ENST00000448539 RAD21O60216 631 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 TLR2O60603 784 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 FKTNO75072 461 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 CYP2C8P10632 490 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 PTH1RQ03431 593 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 STAG1Q8WVM7 1258 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
GTF3C3-206ENST00000448539 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 FGRP09769 529 aa16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 TBC1D10CQ8IV04 446 aa16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.24
GTF3C3-206ENST00000448539 PLIN4Q96Q06 1357 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L15C9J2P7 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L13C9JLJ4 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L11C9JVI0 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L18D6R9N7 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L22D6RA61 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L17D6RBQ6 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 TTLL1O95922 423 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 VCAM1P19320 739 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 NT5C2P49902 561 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms