RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ST13P50502 369 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 TRMT1LQ7Z2T5 733 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 PROCA1Q8NCQ7 364 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 OTUB1Q96FW1 271 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 EIF3CQ99613 913 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 MPP6Q9NZW5 540 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 CAPN11Q9UMQ6 739 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 CCDC169A6NNP5 214 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 LAMC2Q13753 1193 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 STX18Q9P2W9 335 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 VGLL3A8MV65 326 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 MMEP08473 750 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 APBA1Q02410 837 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 EXOC7Q9UPT5 735 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 CASP2P42575 452 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 AP1S2P56377 157 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 NLRP6P59044 892 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 INAQ16352 499 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 SLC26A6Q9BXS9 759 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 C10orf88Q9H8K7 445 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 MYL6BP14649 208 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 KRT9P35527 623 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 IL9RQ01113 521 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 RAPGEF1Q13905 1077 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 BRD3Q15059 726 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 ARHGAP18Q8N392 663 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 MRRFQ96E11 262 aaKnown RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 NAF1Q96HR8 494 aaKnown RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 OATP04181 439 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 CCT2P78371 535 aaKnown RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 BFSP1Q12934 665 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 SYT10Q6XYQ8 523 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 MICU3Q86XE3 530 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 AOPEPQ8N6M6 819 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 ZNF212Q9UDV6 495 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 TRPA1O75762 1119 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 SLC9A1P19634 815 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 ART3Q13508 389 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 CCDC85BQ15834 202 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 CEP55Q53EZ4 464 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 VPS8Q8N3P4 1428 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 LPXNO60711 386 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 TNNC2P02585 160 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 POLD1P28340 1107 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 BIRC3Q13489 604 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 DCAF17Q5H9S7 520 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 C6orf118Q5T5N4 469 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 CNNM4Q6P4Q7 775 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 TMTC1Q8IUR5 882 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 IQUBQ8NA54 791 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 C19orf60Q96EN9 201 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 DTHD1Q6ZMT9 781 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 AHI1Q8N157 1196 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 SKA2Q8WVK7 121 aaPredicted RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
NIPBL-202ENST00000448238 TTLL3Q9Y4R7 772 aa9.82□□□□□ -0.84
NIPBL-202ENST00000448238 FBXW4P57775 412 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 PPP2R5AQ15172 486 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 IFIT1BQ5T764 474 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 TMEM245Q9H330 911 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 TRIM75PA6NK02 468 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 BIRC5O15392 142 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 CTNNA1P35221 906 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 COPB1P53618 953 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 WTAPQ15007 396 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 PANK2Q9BZ23 570 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 TFIP11Q9UBB9 837 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 TLK1Q9UKI8 766 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 CFAP65Q6ZU64 1925 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 RASGRF2O14827 1237 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 CALUO43852 315 aaPredicted RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 ADCK1Q86TW2 530 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 TCP11L2Q8N4U5 519 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 IFT122Q9HBG6 1241 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 CEP78Q5JTW2 689 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 TEDDM1Q5T9Z0 273 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 NCAPG2Q86XI2 1143 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 DDIT3P35638 169 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 STX3Q13277 289 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 SND1Q7KZF4 910 aaKnown RBP eCLIP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 OLFM3Q96PB7 478 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 COG4Q9H9E3 785 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 VPS37BQ9H9H4 285 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 S100A9P06702 114 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 KARSQ15046 597 aaKnown RBP9.81□□□□□ -0.84
NIPBL-202ENST00000448238 LUZP2Q86TE4 346 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 SESTD1Q86VW0 696 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 CCHCR1Q8TD31 782 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 ESR2Q92731 530 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 ZNF229Q9UJW7 825 aa9.81□□□□□ -0.84
NIPBL-202ENST00000448238 ESRRBO95718 433 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms