RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 BAG3O95817 575 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ATP2A2P16615 1042 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 RGS2P41220 211 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 UBASH3AP57075 661 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 MYL5Q02045 173 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PUS10Q3MIT2 529 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 MAATS1Q7Z4T9 603 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 UBE2Q1Q7Z7E8 422 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PNMA8AQ86V59 439 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 CNTROBQ8N137 903 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 NAF1Q96HR8 494 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 CCDC77Q9BR77 488 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 BICRAQ9NZM4 1560 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TMOD4Q9NZQ9 345 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SUCLA2Q9P2R7 463 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 C15orf41Q9Y2V0 281 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ANKRD12Q6UB98 2062 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TMEM110-MUSTN1A8MSY1 372 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TPPPO94811 219 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ACTN3Q08043 901 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 NEK10Q6ZWH5 1172 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TMEM110Q86TL2 294 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 MORC1Q86VD1 984 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CGREF1Q99674 301 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 MTA3Q9BTC8 594 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SAP30BPQ9UHR5 308 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 RRP7AQ9Y3A4 280 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 ARHGEF40Q8TER5 1519 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 FOXP2O15409 715 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 KRT6AP02538 564 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 KRT6BP04259 564 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TNNC1P63316 161 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CWF19L1Q69YN2 538 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 CYB5D1Q6P9G0 228 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TNIP2Q8NFZ5 429 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PANX2Q96RD6 677 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 GORASP1Q9BQQ3 440 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PARD6BQ9BYG5 372 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TRMT1Q9NXH9 659 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 MTUS1Q9ULD2 1270 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CDK13Q14004 1512 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 TMED10P49755 219 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 MYO1EQ12965 1108 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PABPC4Q13310 644 aaKnown RBP eCLIP3.23□□□□□ -1.89
CHD9-203ENST00000447540 INF2Q27J81 1249 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 BEND6Q5SZJ8 279 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 TMC6Q7Z403 805 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 KLHDC4Q8TBB5 520 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 USP26Q9BXU7 913 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CCDC113Q9H0I3 377 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 KRT82Q9NSB4 513 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 FGFR1OP2Q9NVK5 253 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SEMA3EO15041 775 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SART1O43290 800 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 TRPC1P48995 793 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CCDC184Q52MB2 194 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SPATA1Q5VX52 437 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 NUTM2GQ5VZR2 741 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ARHGEF25Q86VW2 580 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CASP10Q92851 521 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ZKSCAN4Q969J2 545 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 RUNDC3BQ96NL0 473 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 NAP1L4Q99733 375 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 FAM129AQ9BZQ8 928 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CBX8Q9HC52 389 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PYCARDQ9ULZ3 195 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 MRFAP1Q9Y605 127 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 ASXL1Q8IXJ9 1541 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 NLRP1Q9C000 1473 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 GOLGA8BA8MQT2 603 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 WDR46O15213 610 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 RAB11FIP3O75154 756 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CCT4P50991 539 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 KIF5AQ12840 1032 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SAFBQ15424 915 aaKnown RBP eCLIP3.23□□□□□ -1.89
CHD9-203ENST00000447540 ANKRD20A8PQ5CZ79 823 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PANK1Q8TE04 598 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 DIS3LQ8TF46 1054 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 MAF1Q9H063 256 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 CFDP1Q9UEE9 299 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 TTC7AQ9ULT0 858 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 HGSO14964 777 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 FMNL1O95466 1100 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 FGFR1OPO95684 399 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 KRT6CP48668 564 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 HDLBPQ00341 1268 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 FAM177A1Q8N128 213 aaPredicted RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 VPS37AQ8NEZ2 397 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 RBM41Q96IZ5 413 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 NUP58Q9BVL2 599 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 EPN3Q9H201 632 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 GOLPH3LQ9H4A5 285 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 SYNCQ9H7C4 482 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 BLOC1S6Q9UL45 172 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 COMMD10Q9Y6G5 202 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 BCORL1Q5H9F3 1711 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 PRPF3O43395 683 aaKnown RBP3.23□□□□□ -1.89
CHD9-203ENST00000447540 WFS1O76024 890 aa3.23□□□□□ -1.89
CHD9-203ENST00000447540 TAF11Q15544 211 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms