RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ATP2B2Q01814 1243 aa14.19□□□□□ -0.14
RFC4-208ENST00000447345 TMEM179Q6ZVK1 233 aa14.19□□□□□ -0.14
RFC4-208ENST00000447345 ZNF296Q8WUU4 475 aaPredicted RBP14.19□□□□□ -0.14
RFC4-208ENST00000447345 ZFYVE28Q9HCC9 887 aa14.19□□□□□ -0.14
RFC4-208ENST00000447345 TMOD4Q9NZQ9 345 aa14.19□□□□□ -0.14
RFC4-208ENST00000447345 COL11A1P12107 1806 aaPredicted RBP14.18□□□□□ -0.14
RFC4-208ENST00000447345 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 FGAP02671 866 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 SLC3A2P08195 630 aaKnown RBP14.18□□□□□ -0.14
RFC4-208ENST00000447345 BACE1P56817 501 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 ICA1Q05084 483 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 ERICH6BQ5W0A0 696 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 CCDC17Q96LX7 622 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 PARK7Q99497 189 aaKnown RBP14.18□□□□□ -0.14
RFC4-208ENST00000447345 CFHR5Q9BXR6 569 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 ZCCHC17Q9NP64 241 aaKnown RBP14.18□□□□□ -0.14
RFC4-208ENST00000447345 AGTPBP1Q9UPW5 1226 aa14.18□□□□□ -0.14
RFC4-208ENST00000447345 ZMYM6O95789 1325 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 RAD50Q92878 1312 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 PDE4BQ07343 736 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 ALX1Q15699 326 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 PROCA1Q8NCQ7 364 aaPredicted RBP14.17□□□□□ -0.14
RFC4-208ENST00000447345 RUFY2Q8WXA3 655 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 INCENPQ9NQS7 918 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
RFC4-208ENST00000447345 RLFQ13129 1914 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 A0A1W2PRG0 241 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 C19orf81C9J6K1 198 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 FKTNO75072 461 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 BMP2KLQ5H9B9 411 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 FAM47AQ5JRC9 791 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
RFC4-208ENST00000447345 USP17L2Q6R6M4 530 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 ZNF444Q8N0Y2 327 aaPredicted RBP14.16□□□□□ -0.14
RFC4-208ENST00000447345 SMCR8Q8TEV9 937 aaPredicted RBP14.16□□□□□ -0.14
RFC4-208ENST00000447345 ZNF287Q9HBT7 754 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 ARHGEF10LQ9HCE6 1279 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 EMILIN3Q9NT22 766 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 TACC3Q9Y6A5 838 aa14.16□□□□□ -0.14
RFC4-208ENST00000447345 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 RAD21O60216 631 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 TLR2O60603 784 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 TSPY3P0CV98 308 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 TSPY8P0CW00 308 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 EEF2P13639 858 aaKnown RBP14.15□□□□□ -0.14
RFC4-208ENST00000447345 TBC1D10CQ8IV04 446 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 CD99L2Q8TCZ2 262 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 DSCC1Q9BVC3 393 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFC4-208ENST00000447345 NBPF3Q9H094 633 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 ANAPC4Q9UJX5 808 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 PNMA3Q9UL41 463 aa14.15□□□□□ -0.14
RFC4-208ENST00000447345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFC4-208ENST00000447345 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.15
RFC4-208ENST00000447345 SGSM2O43147 1006 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
RFC4-208ENST00000447345 VCAM1P19320 739 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 USP14P54578 494 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 IRX3P78415 501 aaPredicted RBP14.14□□□□□ -0.15
RFC4-208ENST00000447345 TFAP4Q01664 338 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 PABPC4Q13310 644 aaKnown RBP eCLIP14.14□□□□□ -0.15
RFC4-208ENST00000447345 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 ASCC2Q9H1I8 757 aaPredicted RBP14.14□□□□□ -0.15
RFC4-208ENST00000447345 KANSL2Q9H9L4 492 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 SLC45A1Q9Y2W3 748 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 DOCK3Q8IZD9 2030 aa14.14□□□□□ -0.15
RFC4-208ENST00000447345 PLIN4Q96Q06 1357 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 TSPY2A6NKD2 308 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 ZNF213O14771 459 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 OSBPP22059 807 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 SP3Q02447 781 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 PTH1RQ03431 593 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 SIAH1Q8IUQ4 282 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 TNS4Q8IZW8 715 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 CEP95Q96GE4 821 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 C12orf42Q96LP6 360 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 RPAP3Q9H6T3 665 aaPredicted RBP14.13□□□□□ -0.15
RFC4-208ENST00000447345 SH2D4AQ9H788 454 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 NEDD4P46934 1319 aa14.13□□□□□ -0.15
RFC4-208ENST00000447345 NMT2O60551 498 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 CDC45O75419 566 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 IMMTQ16891 758 aaKnown RBP14.12□□□□□ -0.15
RFC4-208ENST00000447345 NOM1Q5C9Z4 860 aaKnown RBP14.12□□□□□ -0.15
RFC4-208ENST00000447345 C17orf99Q6UX52 265 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 MFSD6Q6ZSS7 791 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
RFC4-208ENST00000447345 ANKRD13CQ8N6S4 541 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 ERO1AQ96HE7 468 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 ESYT1Q9BSJ8 1104 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 TANGO6Q9C0B7 1094 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 TMX2Q9Y320 296 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 PLXNB2O15031 1838 aa14.12□□□□□ -0.15
RFC4-208ENST00000447345 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 ORC4O43929 436 aa14.11□□□□□ -0.15
RFC4-208ENST00000447345 PEX10O60683 326 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 755.3 ms