RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SCAF8Q9UPN6 1271 aaKnown RBP15.03■□□□□ -0
DDX56-206ENST00000446987 GAKO14976 1311 aa15.02■□□□□ -0
DDX56-206ENST00000446987 SKILP12757 684 aa15.02■□□□□ -0
DDX56-206ENST00000446987 ATP5JP18859 108 aa15.02■□□□□ -0
DDX56-206ENST00000446987 HDLBPQ00341 1268 aaKnown RBP15.02■□□□□ -0
DDX56-206ENST00000446987 ANGEL2Q5VTE6 544 aaKnown RBP15.02■□□□□ -0
DDX56-206ENST00000446987 APOBEC3HQ6NTF7 200 aaKnown RBP15.02■□□□□ -0
DDX56-206ENST00000446987 GLIS2Q9BZE0 524 aaPredicted RBP15.02■□□□□ -0
DDX56-206ENST00000446987 DDX19AQ9NUU7 478 aaKnown RBP15.02■□□□□ -0
DDX56-206ENST00000446987 RAI14Q9P0K7 980 aa15.02■□□□□ -0
DDX56-206ENST00000446987 ABCF2Q9UG63 623 aa15.02■□□□□ -0
DDX56-206ENST00000446987 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.02■□□□□ -0
DDX56-206ENST00000446987 DAGLAQ9Y4D2 1042 aa15.02■□□□□ -0
DDX56-206ENST00000446987 FOCADQ5VW36 1801 aa15.02□□□□□ -0.01
DDX56-206ENST00000446987 TRAF5O00463 557 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 CCP110O43303 1012 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 LDHBP07195 334 aaKnown RBP15.01□□□□□ -0.01
DDX56-206ENST00000446987 CORO7P57737 925 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 MECOMQ03112 1051 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 SMC1AQ14683 1233 aaKnown RBP15.01□□□□□ -0.01
DDX56-206ENST00000446987 LUZP1Q86V48 1076 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 CNTROBQ8N137 903 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 PI4K2BQ8TCG2 481 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 ESYT1Q9BSJ8 1104 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 MRIQ9BWK5 157 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 TMX1Q9H3N1 280 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 RFX7Q2KHR2 1363 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 MAST3O60307 1309 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 PHLPP2Q6ZVD8 1323 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 PITPNM2Q9BZ72 1349 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 EFCAB8A8MWE9 144 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 ADM5C9JUS6 153 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 CASTP20810 708 aaKnown RBP15.01□□□□□ -0.01
DDX56-206ENST00000446987 CCZ1BP86790 482 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 CCZ1P86791 482 aaPredicted RBP15.01□□□□□ -0.01
DDX56-206ENST00000446987 DLGAP5Q15398 846 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 EGFL6Q8IUX8 553 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 UBXN4Q92575 508 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 NSUN4Q96CB9 384 aaKnown RBP15.01□□□□□ -0.01
DDX56-206ENST00000446987 FAM107BQ9H098 131 aa15.01□□□□□ -0.01
DDX56-206ENST00000446987 POLR3GO15318 223 aaPredicted RBP15□□□□□ -0.01
DDX56-206ENST00000446987 CCDC144BQ3MJ40 725 aa15□□□□□ -0.01
DDX56-206ENST00000446987 JAKMIP3Q5VZ66 844 aa15□□□□□ -0.01
DDX56-206ENST00000446987 HHIPL2Q6UWX4 724 aa15□□□□□ -0.01
DDX56-206ENST00000446987 EFCAB13Q8IY85 973 aa15□□□□□ -0.01
DDX56-206ENST00000446987 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
DDX56-206ENST00000446987 TEKT1Q969V4 418 aa15□□□□□ -0.01
DDX56-206ENST00000446987 DRC1Q96MC2 740 aa15□□□□□ -0.01
DDX56-206ENST00000446987 BOLA2Q9H3K6 86 aa15□□□□□ -0.01
DDX56-206ENST00000446987 ECHDC1Q9NTX5 307 aa15□□□□□ -0.01
DDX56-206ENST00000446987 RBM28Q9NW13 759 aaKnown RBP15□□□□□ -0.01
DDX56-206ENST00000446987 IMPACTQ9P2X3 320 aa15□□□□□ -0.01
DDX56-206ENST00000446987 SSC5DA1L4H1 1573 aa15□□□□□ -0.01
DDX56-206ENST00000446987 PAPPA2Q9BXP8 1791 aa15□□□□□ -0.01
DDX56-206ENST00000446987 CEP350Q5VT06 3117 aa15□□□□□ -0.01
DDX56-206ENST00000446987 CLRN2A0PK11 232 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 USP27XA6NNY8 438 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 SNW1Q13573 536 aaKnown RBP14.99□□□□□ -0.01
DDX56-206ENST00000446987 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 ADGRA1Q86SQ6 560 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 HAUS7Q99871 368 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 ZSCAN16Q9H4T2 348 aaPredicted RBP14.99□□□□□ -0.01
DDX56-206ENST00000446987 TCHHQ07283 1943 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 TBC1D8O95759 1140 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 PRR29P0C7W0 189 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 SYT1P21579 422 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 CALRP27797 417 aaKnown RBP14.99□□□□□ -0.01
DDX56-206ENST00000446987 ZRSR1Q15695 479 aaKnown RBP14.99□□□□□ -0.01
DDX56-206ENST00000446987 FAM163AQ96GL9 167 aaPredicted RBP14.99□□□□□ -0.01
DDX56-206ENST00000446987 TDRD3Q9H7E2 651 aaKnown RBP14.99□□□□□ -0.01
DDX56-206ENST00000446987 ADAM21Q9UKJ8 722 aa14.99□□□□□ -0.01
DDX56-206ENST00000446987 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
DDX56-206ENST00000446987 DDX60LQ5H9U9 1706 aaKnown RBP14.98□□□□□ -0.01
DDX56-206ENST00000446987 EIF3CLB5ME19 914 aaKnown RBP14.98□□□□□ -0.01
DDX56-206ENST00000446987 FIBPO43427 364 aa14.98□□□□□ -0.01
DDX56-206ENST00000446987 ANO6Q4KMQ2 910 aa14.98□□□□□ -0.01
DDX56-206ENST00000446987 DZIP1Q86YF9 867 aaKnown RBP14.98□□□□□ -0.01
DDX56-206ENST00000446987 EIF3CQ99613 913 aaKnown RBP14.98□□□□□ -0.01
DDX56-206ENST00000446987 ZNF70Q9UC06 446 aaPredicted RBP14.98□□□□□ -0.01
DDX56-206ENST00000446987 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
DDX56-206ENST00000446987 TTC41PQ6P2S7 1318 aa14.98□□□□□ -0.01
DDX56-206ENST00000446987 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
DDX56-206ENST00000446987 GOLIM4O00461 696 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 CHGBP05060 677 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 RBM5P52756 815 aaKnown RBP eCLIP14.97□□□□□ -0.01
DDX56-206ENST00000446987 SPTY2D1Q68D10 685 aaPredicted RBP14.97□□□□□ -0.01
DDX56-206ENST00000446987 CC2D1AQ6P1N0 951 aaPredicted RBP14.97□□□□□ -0.01
DDX56-206ENST00000446987 KRT26Q7Z3Y9 468 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 GPR161Q8N6U8 529 aaKnown RBP14.97□□□□□ -0.01
DDX56-206ENST00000446987 GPATCH11Q8N954 259 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
DDX56-206ENST00000446987 TADA3O75528 432 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 MAP2K2P36507 400 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 USP8P40818 1118 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 CACNB3P54284 484 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 CDAN1Q8IWY9 1227 aa14.97□□□□□ -0.01
DDX56-206ENST00000446987 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms