RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 TRIM43BA6NCK2 446 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 TRIM66O15016 1216 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 LMOD3Q0VAK6 560 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 PDE3AQ14432 1141 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 FKBP1CQ5VVH2 108 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 FASTKD5Q7L8L6 764 aaKnown RBP8.95□□□□□ -0.98
HDAC9-216ENST00000446646 SCYL3Q8IZE3 742 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 FAM151AQ8WW52 585 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 TRIM43Q96BQ3 446 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-216ENST00000446646 C11orf16Q9NQ32 467 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 AGTPBP1Q9UPW5 1226 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 ATP11BQ9Y2G3 1177 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 SLC45A1Q9Y2W3 748 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 ZDBF2Q9HCK1 2354 aa8.95□□□□□ -0.98
HDAC9-216ENST00000446646 SPTBN4Q9H254 2564 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 RCCD1A6NED2 376 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 FAM86C2PA6NEL3 165 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 FECHP22830 423 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 HDLBPQ00341 1268 aaKnown RBP8.94□□□□□ -0.98
HDAC9-216ENST00000446646 TFF2Q03403 129 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 DIXDC1Q155Q3 683 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 FBXO33Q7Z6M2 555 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 ATXN2LQ8WWM7 1075 aaKnown RBP8.94□□□□□ -0.98
HDAC9-216ENST00000446646 TXNRD2Q9NNW7 524 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 PRDM5Q9NQX1 630 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-216ENST00000446646 TMOD2Q9NZR1 351 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 FLRT1Q9NZU1 646 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 THEGQ9P2T0 379 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 CHMP3Q9Y3E7 222 aa8.94□□□□□ -0.98
HDAC9-216ENST00000446646 PTPRFP10586 1907 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
HDAC9-216ENST00000446646 PDE4DQ08499 809 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 IFIT5Q13325 482 aaKnown RBP8.93□□□□□ -0.98
HDAC9-216ENST00000446646 USP6NLQ92738 828 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 HOOK2Q96ED9 719 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 MTRQ99707 1265 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 PRDM12Q9H4Q4 367 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 ZNF576Q9H609 170 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 PDLIM7Q9NR12 457 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 AK9Q5TCS8 1911 aa8.93□□□□□ -0.98
HDAC9-216ENST00000446646 MYBBP1AQ9BQG0 1328 aaKnown RBP8.92□□□□□ -0.98
HDAC9-216ENST00000446646 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 GRXCR1A8MXD5 290 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 OATP04181 439 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 BMP1P13497 986 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 KCNQ1P51787 676 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 MRPS5P82675 430 aaKnown RBP8.92□□□□□ -0.98
HDAC9-216ENST00000446646 RRP1BQ14684 758 aaKnown RBP8.92□□□□□ -0.98
HDAC9-216ENST00000446646 TRIM60Q495X7 471 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 LMBR1LQ6UX01 489 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 LDHAL6AQ6ZMR3 332 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 TRPV1Q8NER1 839 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 RNPC3Q96LT9 517 aaKnown RBP8.92□□□□□ -0.98
HDAC9-216ENST00000446646 C1QTNF1Q9BXJ1 281 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 ASCC2Q9H1I8 757 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-216ENST00000446646 PORCNQ9H237 461 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 PNNQ9H307 717 aaKnown RBP8.92□□□□□ -0.98
HDAC9-216ENST00000446646 PICK1Q9NRD5 415 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 CNNM1Q9NRU3 951 aa8.92□□□□□ -0.98
HDAC9-216ENST00000446646 PHIPQ8WWQ0 1821 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 DDTLA6NHG4 134 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-216ENST00000446646 ANP32CO43423 234 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 ZKSCAN1P17029 563 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-216ENST00000446646 HMGCS2P54868 508 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 NEXNQ0ZGT2 675 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 Q3C1V9 767 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 GJC2Q5T442 439 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-216ENST00000446646 HHIPL2Q6UWX4 724 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 HCN4Q9Y3Q4 1203 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 NDUFB9Q9Y6M9 179 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 CACNA1GO43497 2377 aa8.91□□□□□ -0.98
HDAC9-216ENST00000446646 ZFHX4Q86UP3 3567 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 WDR87Q6ZQQ6 2873 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 BRWD1Q9NSI6 2320 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 SPP2Q13103 211 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 UBE4AQ14139 1066 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 MORN1Q5T089 497 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 ANO1Q5XXA6 986 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 TIFAQ96CG3 184 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 MRIQ9BWK5 157 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 MORF4L1Q9UBU8 362 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 PRKAG2Q9UGJ0 569 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
HDAC9-216ENST00000446646 ZFHX2Q9C0A1 2572 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 RGS20O76081 388 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 XRCC5P13010 732 aaKnown RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 RGS3P49796 1198 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 MRE11P49959 708 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 COPS2P61201 443 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 MAP3K10Q02779 954 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 SHROOM1Q2M3G4 852 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-216ENST00000446646 AKNAD1Q5T1N1 836 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 CCDC30Q5VVM6 783 aa8.89□□□□□ -0.99
HDAC9-216ENST00000446646 SLC39A5Q6ZMH5 540 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms