RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 PRDM7Q9NQW5 492 aa7.16□□□□□ -1.26
LINC00440-201ENST00000446579 ADAMTS1Q9UHI8 967 aa7.16□□□□□ -1.26
LINC00440-201ENST00000446579 TACC3Q9Y6A5 838 aa7.16□□□□□ -1.26
LINC00440-201ENST00000446579 PRAMEF27A3QJZ7 478 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 TFE3P19532 575 aaPredicted RBP7.15□□□□□ -1.26
LINC00440-201ENST00000446579 SEPT6Q14141 434 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 CCDC144BQ3MJ40 725 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 WIPI1Q5MNZ9 446 aaPredicted RBP7.15□□□□□ -1.26
LINC00440-201ENST00000446579 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.15□□□□□ -1.26
LINC00440-201ENST00000446579 RELL1Q8IUW5 271 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 KIAA0825Q8IV33 1275 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 TMEM40Q8WWA1 233 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 RHOVQ96L33 236 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 TMEM74Q96NL1 305 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.15□□□□□ -1.26
LINC00440-201ENST00000446579 SPON2Q9BUD6 331 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 WNT10AQ9GZT5 417 aa7.15□□□□□ -1.26
LINC00440-201ENST00000446579 DBX1A6NMT0 343 aa7.14□□□□□ -1.27
LINC00440-201ENST00000446579 IKZF1Q13422 519 aa7.14□□□□□ -1.27
LINC00440-201ENST00000446579 SLC23A3Q6PIS1 610 aa7.14□□□□□ -1.27
LINC00440-201ENST00000446579 CCDC84Q86UT8 332 aaPredicted RBP7.14□□□□□ -1.27
LINC00440-201ENST00000446579 PHC3Q8NDX5 983 aa7.14□□□□□ -1.27
LINC00440-201ENST00000446579 HEXIM2Q96MH2 286 aaKnown RBP7.14□□□□□ -1.27
LINC00440-201ENST00000446579 GTF2IRD1Q9UHL9 959 aa7.14□□□□□ -1.27
LINC00440-201ENST00000446579 TLR6Q9Y2C9 796 aa7.14□□□□□ -1.27
LINC00440-201ENST00000446579 GFRA2O00451 464 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 STK10O94804 968 aaKnown RBP7.13□□□□□ -1.27
LINC00440-201ENST00000446579 LRIG2O94898 1065 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 GARTP22102 1010 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 EIF4A3P38919 411 aaKnown RBP7.13□□□□□ -1.27
LINC00440-201ENST00000446579 ETF1P62495 437 aaKnown RBP7.13□□□□□ -1.27
LINC00440-201ENST00000446579 ZP2Q05996 745 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 NBPF6Q5VWK0 638 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 ASB11Q8WXH4 323 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 NBPF4Q96M43 638 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 NT5C1AQ9BXI3 368 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
LINC00440-201ENST00000446579 LRRC10BA6NIK2 292 aa7.12□□□□□ -1.27
LINC00440-201ENST00000446579 COL9A2Q14055 689 aaPredicted RBP7.12□□□□□ -1.27
LINC00440-201ENST00000446579 UBE3DQ7Z6J8 389 aa7.12□□□□□ -1.27
LINC00440-201ENST00000446579 HID1Q8IV36 788 aa7.12□□□□□ -1.27
LINC00440-201ENST00000446579 JARID2Q92833 1246 aaPredicted RBP7.12□□□□□ -1.27
LINC00440-201ENST00000446579 EAF1Q96JC9 268 aaPredicted RBP7.12□□□□□ -1.27
LINC00440-201ENST00000446579 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
LINC00440-201ENST00000446579 SNX11Q9Y5W9 270 aa7.12□□□□□ -1.27
LINC00440-201ENST00000446579 GNAT3A8MTJ3 354 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 GREM1O60565 184 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 GBP2P32456 591 aaPredicted RBP7.11□□□□□ -1.27
LINC00440-201ENST00000446579 CAP2P40123 477 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 SOX9P48436 509 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 CDK8P49336 464 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 RPL6Q02878 288 aaKnown RBP7.11□□□□□ -1.27
LINC00440-201ENST00000446579 LMNB2Q03252 620 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 KCNMB1Q16558 191 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 ARMCX6Q7L4S7 300 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 ZSWIM9Q86XI8 627 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 ZNF296Q8WUU4 475 aaPredicted RBP7.11□□□□□ -1.27
LINC00440-201ENST00000446579 FOXQ1Q9C009 403 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 OSBPL2Q9H1P3 480 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 TNKS2Q9H2K2 1166 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 STRIP2Q9ULQ0 834 aa7.11□□□□□ -1.27
LINC00440-201ENST00000446579 GRK4P32298 578 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 PDE4BQ07343 736 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 CAMK2GQ13555 558 aaPredicted RBP7.1□□□□□ -1.27
LINC00440-201ENST00000446579 SLBPQ14493 270 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC00440-201ENST00000446579 MLANAQ16655 118 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 FBXL19Q6PCT2 694 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 MFSD2AQ8NA29 543 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 PIF1Q9H611 641 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 FBRSQ9HAH7 460 aa7.1□□□□□ -1.27
LINC00440-201ENST00000446579 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
LINC00440-201ENST00000446579 TLDC2A0PJX2 215 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 MINDY4BA8MYZ0 360 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00440-201ENST00000446579 BPNT1O95861 308 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 PF4P02776 101 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 NASPP49321 788 aaPredicted RBP7.09□□□□□ -1.27
LINC00440-201ENST00000446579 SERINC3Q13530 473 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 FAM84AQ96KN4 292 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 TBX22Q9Y458 520 aa7.09□□□□□ -1.27
LINC00440-201ENST00000446579 SUPT16HQ9Y5B9 1047 aaKnown RBP7.09□□□□□ -1.27
LINC00440-201ENST00000446579 F6X3S4 739 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 CILPO75339 1184 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 PGRP06401 933 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 FAM214BQ7L5A3 538 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 SPACA3Q8IXA5 215 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 CKAP2LQ8IYA6 745 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 FLAD1Q8NFF5 587 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 GATAD2BQ8WXI9 593 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 ZSWIM4Q9H7M6 989 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 FAM53CQ9NYF3 392 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 ADAM30Q9UKF2 790 aa7.08□□□□□ -1.28
LINC00440-201ENST00000446579 FAM221AA4D161 298 aa7.07□□□□□ -1.28
LINC00440-201ENST00000446579 EOMESO95936 686 aa7.07□□□□□ -1.28
LINC00440-201ENST00000446579 CST3P01034 146 aaPredicted RBP7.07□□□□□ -1.28
LINC00440-201ENST00000446579 NKG7Q16617 165 aa7.07□□□□□ -1.28
LINC00440-201ENST00000446579 NKPD1Q17RQ9 610 aa7.07□□□□□ -1.28
LINC00440-201ENST00000446579 ZNF746Q6NUN9 644 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms