RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ANO6Q4KMQ2 910 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 DALRD3Q5D0E6 543 aaKnown RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 HAUS1Q96CS2 278 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 IFT122Q9HBG6 1241 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 MAP3K4Q9Y6R4 1608 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 TRIM37O94972 964 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 PDE4DQ08499 809 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 CCDC129Q6ZRS4 1044 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 DEPTORQ8TB45 409 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 DDX23Q9BUQ8 820 aaKnown RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF804BA4D1E1 1349 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 OVOS2A0A0G2JMS6 1433 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 OVOS2A0A0J9YW53 1432 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 OVOS2Q6IE36 1432 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 VWA3AA6NCI4 1184 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 B4E1Z4 1266 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 DCAF17Q5H9S7 520 aaPredicted RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 E7EVH7 732 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 LGSNQ5TDP6 509 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 SND1Q7KZF4 910 aaKnown RBP eCLIP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 VAV2P52735 878 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 MUM1L1Q5H9M0 696 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 COPB2P35606 906 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 TIMM10P62072 90 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 RAB11FIP4Q86YS3 637 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 GLG1Q92896 1179 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 SMC6Q96SB8 1091 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 LRWD1Q9UFC0 647 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 KCTD2Q14681 263 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ANO1Q5XXA6 986 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 TGFBRAP1Q8WUH2 860 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 CACYBPQ9HB71 228 aaKnown RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 SLC27A2O14975 620 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 AOC3Q16853 763 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 IPO4Q8TEX9 1081 aaKnown RBP9.5□□□□□ -0.89
PTPN3-204ENST00000446349 PPP1R7Q15435 360 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 NSMFQ6X4W1 530 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF274Q96GC6 653 aaPredicted RBP9.5□□□□□ -0.89
PTPN3-204ENST00000446349 NOC4LQ9BVI4 516 aaKnown RBP9.5□□□□□ -0.89
PTPN3-204ENST00000446349 LRRC2Q9BYS8 371 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 ARFGAP3Q9NP61 516 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 ANAPC4Q9UJX5 808 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 F8W8V4 182 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 TNNC2P02585 160 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 UBE3CQ15386 1083 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 ANKRD35Q8N283 1001 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 FLOT1O75955 427 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 SLC9C1Q4G0N8 1177 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 CDC42BPAQ5VT25 1732 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 FBXO11Q86XK2 927 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 TRIML1Q8N9V2 468 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 SNX29Q8TEQ0 813 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 DACT1Q9NYF0 836 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 IQGAP3Q86VI3 1631 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 MED23Q9ULK4 1368 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 TYW5A2RUC4 315 aaKnown RBP9.5□□□□□ -0.89
PTPN3-204ENST00000446349 DNA2P51530 1060 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 UTP14CQ5TAP6 766 aaKnown RBP9.5□□□□□ -0.89
PTPN3-204ENST00000446349 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 USP6P35125 1406 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 TFAP4Q01664 338 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 ASIC2Q16515 512 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 HS1BP3Q53T59 392 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 MIER3Q7Z3K6 550 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 TEKT3Q9BXF9 490 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 A2ML1A8K2U0 1454 aa9.5□□□□□ -0.89
PTPN3-204ENST00000446349 SYT1P21579 422 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 TSHZ3Q63HK5 1081 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 CFAP57Q96MR6 1250 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 CUEDC2Q9H467 287 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 SARNPP82979 210 aaKnown RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 SP4Q02446 784 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 PPARAQ07869 468 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 NCAPH2Q6IBW4 605 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 CFBP00751 764 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 GCFC2P16383 781 aaKnown RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 HOXD10P28358 340 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 POSTNQ15063 836 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 ABCB5Q2M3G0 1257 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 AKR1B15C9JRZ8 316 aaPredicted RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 IGHDP01880 384 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 FBLN1P23142 703 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 HAUS7Q99871 368 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 CPXCR1Q8N123 301 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 MYCT1Q8N699 235 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 MRPL44Q9H9J2 332 aaKnown RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 ATP8B3O60423 1300 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 NFKBIAP25963 317 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 PPP2R3AQ06190 1150 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms