RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 UBL4BQ8N7F7 174 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 PLVAPQ9BX97 442 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 VCX3BQ9H321 246 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 V9GY48 417 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 MCM7P33993 719 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 PEX26Q7Z412 305 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 ABTB1Q969K4 478 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 SPDL1Q96EA4 605 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 ZNF274Q96GC6 653 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 FBXO3Q9UK99 471 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 SLC9C1Q4G0N8 1177 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 NOSTRINQ8IVI9 506 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 PAX7P23759 505 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 SMTNP53814 917 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 EIF4A2Q14240 407 aaKnown RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 CRYMQ14894 314 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 SLC30A9Q6PML9 568 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 TBC1D1Q86TI0 1168 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 GPATCH8Q9UKJ3 1502 aaKnown RBP8.72□□□□□ -1.01
SMG1-202ENST00000446231 SLC4A4Q9Y6R1 1079 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 A0A0D9SFI3 127 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 SLC5A1P13866 664 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 EPHB4P54760 987 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 CASP14P31944 242 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 RCSD1Q6JBY9 416 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 STXBP3O00186 592 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 FOXO3O43524 673 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 SKIP12755 728 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 FNBP4Q8N3X1 1017 aaPredicted RBP8.72□□□□□ -1.01
SMG1-202ENST00000446231 USP5P45974 858 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 ANKRD42Q8N9B4 389 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 BLZF1Q9H2G9 400 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 CFAP73A6NFT4 308 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 TRAF5O00463 557 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 TAF5LO75529 589 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 FOXR1Q6PIV2 292 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 ARHGEF25Q86VW2 580 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 ESR2Q92731 530 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 VIPAS39Q9H9C1 493 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 GPIHBP1Q8IV16 184 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 STAMBPO95630 424 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 C2orf54Q08AI8 447 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
SMG1-202ENST00000446231 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 LRRC31Q6UY01 552 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 ARHGAP5Q13017 1502 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 CTNND1O60716 968 aaKnown RBP8.72□□□□□ -1.01
SMG1-202ENST00000446231 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 YIPF3Q9GZM5 350 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 EPB41L5Q9HCM4 733 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 TCHPQ9BT92 498 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 FAM114A2Q9NRY5 505 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 COBLO75128 1261 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 GUCY1A3Q02108 690 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 PLCB4Q15147 1175 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 CCNI2Q6ZMN8 369 aaPredicted RBP8.72□□□□□ -1.01
SMG1-202ENST00000446231 ZNF446Q9NWS9 450 aa8.72□□□□□ -1.01
SMG1-202ENST00000446231 ATP2A1O14983 1001 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 MFAP3LO75121 409 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.01
SMG1-202ENST00000446231 PZPP20742 1482 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 CFAP57Q96MR6 1250 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 CASQ2O14958 399 aaPredicted RBP8.71□□□□□ -1.01
SMG1-202ENST00000446231 TBCAO75347 108 aaKnown RBP8.71□□□□□ -1.01
SMG1-202ENST00000446231 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.01
SMG1-202ENST00000446231 TTC38Q5R3I4 469 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 TCERG1LQ5VWI1 586 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 USP44Q9H0E7 712 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 HDAC6Q9UBN7 1215 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 RNF14Q9UBS8 474 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 SBNO2Q9Y2G9 1366 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 MYO1FO00160 1098 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 RPN1P04843 607 aaKnown RBP8.71□□□□□ -1.01
SMG1-202ENST00000446231 RWDD2BP57060 319 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 CLUL1Q15846 466 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 CNNM4Q6P4Q7 775 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 HOMER3Q9NSC5 361 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 ANAPC4Q9UJX5 808 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 PHKBQ93100 1093 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 CD248Q9HCU0 757 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 FAM135AQ9P2D6 1515 aa8.71□□□□□ -1.01
SMG1-202ENST00000446231 FGD4Q96M96 766 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 PCDHA13Q9Y5I0 950 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 GRIN2BQ13224 1484 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 NAIF1Q69YI7 327 aaPredicted RBP8.71□□□□□ -1.02
SMG1-202ENST00000446231 CENPKQ9BS16 269 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 PLAAQ9Y263 795 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 I3L4J1 428 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 COG7P83436 770 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 SSH3Q8TE77 659 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 VCX3AQ9NNX9 186 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 PDIA3P30101 505 aaKnown RBP8.71□□□□□ -1.02
SMG1-202ENST00000446231 CCDC152Q4G0S7 254 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 H3BQF6 201 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 NOL3O60936 208 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms