RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 GTF3C6Q969F1 213 aa11.15□□□□□ -0.62
NPHP1-207ENST00000445609 KAT14Q9H8E8 782 aa11.15□□□□□ -0.62
NPHP1-207ENST00000445609 KANSL2Q9H9L4 492 aa11.15□□□□□ -0.62
NPHP1-207ENST00000445609 FOXD4L1Q9NU39 408 aa11.15□□□□□ -0.62
NPHP1-207ENST00000445609 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
NPHP1-207ENST00000445609 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
NPHP1-207ENST00000445609 GDF11O95390 407 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 RCAN1P53805 252 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
NPHP1-207ENST00000445609 SCRN1Q12765 414 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 RRP1BQ14684 758 aaKnown RBP11.14□□□□□ -0.63
NPHP1-207ENST00000445609 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.14□□□□□ -0.63
NPHP1-207ENST00000445609 PHF20L1A8MW92 1017 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
NPHP1-207ENST00000445609 TTLL1O95922 423 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 GH2P01242 217 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 CAP2P40123 477 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPHP1-207ENST00000445609 ST3GAL1Q11201 340 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 USP48Q86UV5 1035 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 MICU3Q86XE3 530 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 MYL10Q9BUA6 226 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 SIPA1L1O43166 1804 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 SCN4AP35499 1836 aa11.14□□□□□ -0.63
NPHP1-207ENST00000445609 CALM1P0DP23 149 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 CALM2P0DP24 149 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 CALM3P0DP25 149 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
NPHP1-207ENST00000445609 SEPT2Q15019 361 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 RAB11FIP4Q86YS3 637 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 ZNF341Q9BYN7 854 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
NPHP1-207ENST00000445609 CLIP2Q9UDT6 1046 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 DDAH1O94760 285 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 JAG1P78504 1218 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 TROAPQ12815 778 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 SHROOM1Q2M3G4 852 aaPredicted RBP11.13□□□□□ -0.63
NPHP1-207ENST00000445609 FANCBQ8NB91 859 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 PNMA1Q8ND90 353 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 NYAP2Q9P242 653 aa11.13□□□□□ -0.63
NPHP1-207ENST00000445609 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 CTNND1O60716 968 aaKnown RBP11.12□□□□□ -0.63
NPHP1-207ENST00000445609 RXRAP19793 462 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 PPP2R5BQ15173 497 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
NPHP1-207ENST00000445609 LLPHQ9BRT6 129 aaKnown RBP11.12□□□□□ -0.63
NPHP1-207ENST00000445609 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
NPHP1-207ENST00000445609 ZNF112Q9UJU3 913 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 CPLX1O14810 134 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 ASNSP08243 561 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 ICA1Q05084 483 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 RTN1Q16799 776 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 CLEC10AQ8IUN9 316 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 GINM1Q9NU53 330 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 SMC3Q9UQE7 1217 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 NID2Q14112 1375 aa11.12□□□□□ -0.63
NPHP1-207ENST00000445609 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 POTEJP0CG39 1038 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 ADD1P35611 737 aaKnown RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 SIAH1Q8IUQ4 282 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 MKL1Q969V6 931 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 GLIS2Q9BZE0 524 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 PPP1R12BO60237 982 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 CDC27P30260 824 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 NF2P35240 595 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-207ENST00000445609 KLRG1Q96E93 195 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 WRNIP1Q96S55 665 aa11.11□□□□□ -0.63
NPHP1-207ENST00000445609 CDKL5O76039 1030 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 INPP5BP32019 993 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 KIF5BP33176 963 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 MAP1SQ66K74 1059 aaPredicted RBP11.1□□□□□ -0.63
NPHP1-207ENST00000445609 LRRC47Q8N1G4 583 aaKnown RBP11.1□□□□□ -0.63
NPHP1-207ENST00000445609 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
NPHP1-207ENST00000445609 USP2O75604 605 aaPredicted RBP11.1□□□□□ -0.63
NPHP1-207ENST00000445609 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 PRKG1Q13976 671 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 NSUN7Q8NE18 718 aaKnown RBP11.1□□□□□ -0.63
NPHP1-207ENST00000445609 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 SYNPO2Q9UMS6 1093 aa11.1□□□□□ -0.63
NPHP1-207ENST00000445609 SSC5DA1L4H1 1573 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms