RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 EVX2Q03828 476 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 GPR142Q7Z601 462 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 EDC3Q96F86 508 aaKnown RBP18.73■□□□□ 0.59
SEC13-213ENST00000445064 ZBTB40Q9NUA8 1239 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 ZNF532Q9HCE3 1301 aa18.73■□□□□ 0.59
SEC13-213ENST00000445064 HMMRO75330 724 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 XRCC5P13010 732 aaKnown RBP18.72■□□□□ 0.59
SEC13-213ENST00000445064 GUCY1A2P33402 732 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 USP14P54578 494 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 CATSPERGQ6ZRH7 1159 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 PLEKHH3Q7Z736 793 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 ANKLE1Q8NAG6 615 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.72■□□□□ 0.59
SEC13-213ENST00000445064 GTF3C2Q8WUA4 911 aaPredicted RBP18.72■□□□□ 0.59
SEC13-213ENST00000445064 SDR42E1Q8WUS8 393 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 USP6NLQ92738 828 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 CRNKL1Q9BZJ0 848 aaKnown RBP18.72■□□□□ 0.59
SEC13-213ENST00000445064 KIAA1683Q9H0B3 1180 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 MCM9Q9NXL9 1143 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 RABGAP1Q9Y3P9 1069 aa18.72■□□□□ 0.59
SEC13-213ENST00000445064 TCRBV5S4A2TA0A5A2 114 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 CNMDO75829 334 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
SEC13-213ENST00000445064 GABPAQ06546 454 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 CACNB2Q08289 660 aaPredicted RBP18.71■□□□□ 0.59
SEC13-213ENST00000445064 SEPT2Q15019 361 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 CCL14Q16627 93 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 MORN1Q5T089 497 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 PRO3102Q9H379 93 aa18.71■□□□□ 0.59
SEC13-213ENST00000445064 MPHOSPH10O00566 681 aaKnown RBP18.7■□□□□ 0.58
SEC13-213ENST00000445064 RAB11FIP3O75154 756 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 VCAM1P19320 739 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 RGS2P41220 211 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 MNX1P50219 401 aaPredicted RBP18.7■□□□□ 0.58
SEC13-213ENST00000445064 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 LCORLQ8N3X6 602 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 NBPF3Q9H094 633 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 BOLA2Q9H3K6 86 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
SEC13-213ENST00000445064 STAP2Q9UGK3 403 aa18.7■□□□□ 0.58
SEC13-213ENST00000445064 CYP2D6P10635 497 aa18.69■□□□□ 0.58
SEC13-213ENST00000445064 ZKSCAN1P17029 563 aaPredicted RBP18.69■□□□□ 0.58
SEC13-213ENST00000445064 WDR78Q5VTH9 848 aa18.69■□□□□ 0.58
SEC13-213ENST00000445064 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
SEC13-213ENST00000445064 RPAP3Q9H6T3 665 aaPredicted RBP18.69■□□□□ 0.58
SEC13-213ENST00000445064 ARMT1Q9H993 441 aa18.69■□□□□ 0.58
SEC13-213ENST00000445064 DCP1AQ9NPI6 582 aaPredicted RBP18.69■□□□□ 0.58
SEC13-213ENST00000445064 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
SEC13-213ENST00000445064 OGDHLQ9ULD0 1010 aa18.69■□□□□ 0.58
SEC13-213ENST00000445064 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
SEC13-213ENST00000445064 PRKAB2O43741 272 aa18.68■□□□□ 0.58
SEC13-213ENST00000445064 CCND3P30281 292 aaPredicted RBP18.68■□□□□ 0.58
SEC13-213ENST00000445064 CCNA1P78396 465 aa18.68■□□□□ 0.58
SEC13-213ENST00000445064 MAP2K5Q13163 448 aa18.68■□□□□ 0.58
SEC13-213ENST00000445064 C11orf49Q9H6J7 331 aa18.68■□□□□ 0.58
SEC13-213ENST00000445064 PAG1Q9NWQ8 432 aa18.68■□□□□ 0.58
SEC13-213ENST00000445064 C7orf61Q8IZ16 206 aa18.67■□□□□ 0.58
SEC13-213ENST00000445064 SLC44A5Q8NCS7 719 aa18.67■□□□□ 0.58
SEC13-213ENST00000445064 DYNLL2Q96FJ2 89 aa18.67■□□□□ 0.58
SEC13-213ENST00000445064 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
SEC13-213ENST00000445064 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
SEC13-213ENST00000445064 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
SEC13-213ENST00000445064 CHGBP05060 677 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 ATP5JP18859 108 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 PTPREP23469 700 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 ADD2P35612 726 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 LBX2Q6XYB7 198 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 APBA2Q99767 749 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 CHMP4BQ9H444 224 aaKnown RBP18.66■□□□□ 0.58
SEC13-213ENST00000445064 ZMYND8Q9ULU4 1186 aaPredicted RBP18.66■□□□□ 0.58
SEC13-213ENST00000445064 NAV1Q8NEY1 1877 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 ALPK3Q96L96 1907 aa18.66■□□□□ 0.58
SEC13-213ENST00000445064 DDX60LQ5H9U9 1706 aaKnown RBP18.66■□□□□ 0.58
SEC13-213ENST00000445064 CEP290O15078 2479 aa18.65■□□□□ 0.58
SEC13-213ENST00000445064 MBD4O95243 580 aa18.65■□□□□ 0.58
SEC13-213ENST00000445064 COG2Q14746 738 aa18.65■□□□□ 0.58
SEC13-213ENST00000445064 C20orf194Q5TEA3 1177 aa18.65■□□□□ 0.58
SEC13-213ENST00000445064 LHX8Q68G74 356 aa18.65■□□□□ 0.58
SEC13-213ENST00000445064 FLRT1Q9NZU1 646 aa18.65■□□□□ 0.58
SEC13-213ENST00000445064 SLC15A5A6NIM6 579 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 SMIM22K7EJ46 135 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 SYN1P17600 705 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 KIAA1755Q5JYT7 1200 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 HAUS7Q99871 368 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 SWAP70Q9UH65 585 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 IVNS1ABPQ9Y6Y0 642 aa18.64■□□□□ 0.57
SEC13-213ENST00000445064 CYP2D7A0A087X1C5 515 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms