RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
SSBP3-208ENST00000444533 A0A0G2JLL6 359 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 TESPA1A2RU30 521 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 ORC4O43929 436 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 MTMR2Q13614 643 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 PRRT2Q7Z6L0 340 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 PROCA1Q8NCQ7 364 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 ZIC5Q96T25 663 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 IL25Q9H293 177 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 WBP1LQ9NX94 342 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 PNMA3Q9UL41 463 aa16.67■□□□□ 0.26
SSBP3-208ENST00000444533 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
SSBP3-208ENST00000444533 CEP350Q5VT06 3117 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 SMIM22K7EJ46 135 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 HMGCS2P54868 508 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 PTH1RQ03431 593 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 CCDC178Q5BJE1 867 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
SSBP3-208ENST00000444533 ANKRD23Q86SG2 305 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 IQCA1Q86XH1 822 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 BRI3BPQ8WY22 251 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 THSD7BQ9C0I4 1608 aa16.66■□□□□ 0.26
SSBP3-208ENST00000444533 RAD21O60216 631 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 TRPA1O75762 1119 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 TTLL1O95922 423 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 HSPA1AP0DMV8 641 aaKnown RBP16.65■□□□□ 0.26
SSBP3-208ENST00000444533 HSPA1BP0DMV9 641 aaKnown RBP16.65■□□□□ 0.26
SSBP3-208ENST00000444533 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-208ENST00000444533 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-208ENST00000444533 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
SSBP3-208ENST00000444533 FAM47AQ5JRC9 791 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 KIAA1683Q9H0B3 1180 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
SSBP3-208ENST00000444533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
SSBP3-208ENST00000444533 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 FGRP09769 529 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 OSBPP22059 807 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 MCCP23508 829 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 JAG1P78504 1218 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 SHROOM1Q2M3G4 852 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-208ENST00000444533 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 PARK7Q99497 189 aaKnown RBP16.64■□□□□ 0.25
SSBP3-208ENST00000444533 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
SSBP3-208ENST00000444533 RNF186Q9NXI6 227 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 SLC45A1Q9Y2W3 748 aa16.64■□□□□ 0.25
SSBP3-208ENST00000444533 PDHXO00330 501 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
SSBP3-208ENST00000444533 GUCY1A2P33402 732 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 CTCFP49711 727 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-208ENST00000444533 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-208ENST00000444533 SART3Q15020 963 aaKnown RBP16.63■□□□□ 0.25
SSBP3-208ENST00000444533 TBC1D10CQ8IV04 446 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 SMCR8Q8TEV9 937 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-208ENST00000444533 LPAR1Q92633 364 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 SYNPO2Q9UMS6 1093 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 PLIN4Q96Q06 1357 aa16.63■□□□□ 0.25
SSBP3-208ENST00000444533 ERICH2A1L162 156 aa16.62■□□□□ 0.25
SSBP3-208ENST00000444533 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSBP3-208ENST00000444533 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
SSBP3-208ENST00000444533 CYP21A2P08686 494 aa16.62■□□□□ 0.25
SSBP3-208ENST00000444533 CEP95Q96GE4 821 aa16.62■□□□□ 0.25
SSBP3-208ENST00000444533 PTPN18Q99952 460 aa16.62■□□□□ 0.25
SSBP3-208ENST00000444533 TMX2Q9Y320 296 aa16.62■□□□□ 0.25
SSBP3-208ENST00000444533 B4E1Z4 1266 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 KDM4AO75164 1064 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 KRT32Q14532 448 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 C12orf42Q96LP6 360 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 VCPKMTQ9H867 229 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 INCENPQ9NQS7 918 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
SSBP3-208ENST00000444533 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 SLC27A2O14975 620 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 CREB3L3Q68CJ9 461 aa16.6■□□□□ 0.25
SSBP3-208ENST00000444533 TTC14Q96N46 770 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms