RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 MKNK2Q9HBH9 465 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 ROBO3Q96MS0 1386 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 USP17L10C9JJH3 530 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 RASA1P20936 1047 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 TICAM2Q86XR7 235 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 FEZ1Q99689 392 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 ZFYVE28Q9HCC9 887 aa21.6■■□□□ 1.05
LRCH1-204ENST00000443945 GINM1Q9NU53 330 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 A0A1W2PRG0 241 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 HIP1O00291 1037 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 HAND2P61296 217 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 TPRNQ4KMQ1 711 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 CPA4Q9UI42 421 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 TACC3Q9Y6A5 838 aa21.59■■□□□ 1.05
LRCH1-204ENST00000443945 CHMLP26374 656 aa21.58■■□□□ 1.05
LRCH1-204ENST00000443945 TMEM179Q6ZVK1 233 aa21.58■■□□□ 1.05
LRCH1-204ENST00000443945 TBC1D2Q9BYX2 928 aa21.58■■□□□ 1.05
LRCH1-204ENST00000443945 EMILIN3Q9NT22 766 aa21.58■■□□□ 1.05
LRCH1-204ENST00000443945 AGTPBP1Q9UPW5 1226 aa21.58■■□□□ 1.05
LRCH1-204ENST00000443945 CAP1Q01518 475 aa21.57■■□□□ 1.04
LRCH1-204ENST00000443945 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.57■■□□□ 1.04
LRCH1-204ENST00000443945 LOC285556D6RIA3 1793 aa21.57■■□□□ 1.04
LRCH1-204ENST00000443945 TLR2O60603 784 aa21.57■■□□□ 1.04
LRCH1-204ENST00000443945 ATP2B2Q01814 1243 aa21.57■■□□□ 1.04
LRCH1-204ENST00000443945 SH3D19Q5HYK7 790 aa21.57■■□□□ 1.04
LRCH1-204ENST00000443945 SIAH1Q8IUQ4 282 aa21.57■■□□□ 1.04
LRCH1-204ENST00000443945 PROCA1Q8NCQ7 364 aaPredicted RBP21.57■■□□□ 1.04
LRCH1-204ENST00000443945 FKTNO75072 461 aa21.56■■□□□ 1.04
LRCH1-204ENST00000443945 ICA1Q05084 483 aa21.56■■□□□ 1.04
LRCH1-204ENST00000443945 FAM47AQ5JRC9 791 aa21.56■■□□□ 1.04
LRCH1-204ENST00000443945 CCDC17Q96LX7 622 aa21.56■■□□□ 1.04
LRCH1-204ENST00000443945 ZCCHC17Q9NP64 241 aaKnown RBP21.56■■□□□ 1.04
LRCH1-204ENST00000443945 TMOD4Q9NZQ9 345 aa21.56■■□□□ 1.04
LRCH1-204ENST00000443945 MFAP1P55081 439 aaKnown RBP21.55■■□□□ 1.04
LRCH1-204ENST00000443945 ALX1Q15699 326 aa21.55■■□□□ 1.04
LRCH1-204ENST00000443945 CD99L2Q8TCZ2 262 aa21.55■■□□□ 1.04
LRCH1-204ENST00000443945 PARK7Q99497 189 aaKnown RBP21.55■■□□□ 1.04
LRCH1-204ENST00000443945 C19orf81C9J6K1 198 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 TNS4Q8IZW8 715 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 ZNF444Q8N0Y2 327 aaPredicted RBP21.54■■□□□ 1.04
LRCH1-204ENST00000443945 EEF2P13639 858 aaKnown RBP21.54■■□□□ 1.04
LRCH1-204ENST00000443945 SP3Q02447 781 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 PDE4BQ07343 736 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 KIAA1755Q5JYT7 1200 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 SMCR8Q8TEV9 937 aaPredicted RBP21.54■■□□□ 1.04
LRCH1-204ENST00000443945 NBPF3Q9H094 633 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 KIAA1683Q9H0B3 1180 aa21.54■■□□□ 1.04
LRCH1-204ENST00000443945 ADGRA2Q96PE1 1338 aa21.53■■□□□ 1.04
LRCH1-204ENST00000443945 ZSWIM8A7E2V4 1837 aa21.53■■□□□ 1.04
LRCH1-204ENST00000443945 PEX10O60683 326 aa21.53■■□□□ 1.04
LRCH1-204ENST00000443945 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
LRCH1-204ENST00000443945 ARHGAP39Q9C0H5 1083 aa21.53■■□□□ 1.04
LRCH1-204ENST00000443945 ASCC2Q9H1I8 757 aaPredicted RBP21.53■■□□□ 1.04
LRCH1-204ENST00000443945 SLC3A2P08195 630 aaKnown RBP21.52■■□□□ 1.04
LRCH1-204ENST00000443945 NOM1Q5C9Z4 860 aaKnown RBP21.52■■□□□ 1.04
LRCH1-204ENST00000443945 C17orf99Q6UX52 265 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 SPICE1Q8N0Z3 855 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 TOMM22Q9NS69 142 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.52■■□□□ 1.04
LRCH1-204ENST00000443945 VCAM1P19320 739 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 BMP2KLQ5H9B9 411 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 RRP12Q5JTH9 1297 aaKnown RBP21.52■■□□□ 1.04
LRCH1-204ENST00000443945 TBC1D10CQ8IV04 446 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 NKX2-3Q8TAU0 364 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 ANAPC4Q9UJX5 808 aa21.52■■□□□ 1.04
LRCH1-204ENST00000443945 RAD21O60216 631 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 TFAP4Q01664 338 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 PTH1RQ03431 593 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 KANSL2Q9H9L4 492 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 ZNF287Q9HBT7 754 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 SLC45A1Q9Y2W3 748 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 GREB1LQ9C091 1923 aaPredicted RBP21.51■■□□□ 1.03
LRCH1-204ENST00000443945 TSPY3P0CV98 308 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 TSPY8P0CW00 308 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 CEP95Q96GE4 821 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
LRCH1-204ENST00000443945 ZMYM6O95789 1325 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 RANBP6O60518 1105 aaKnown RBP21.5■■□□□ 1.03
LRCH1-204ENST00000443945 NMT2O60551 498 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 USP14P54578 494 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 IRX3P78415 501 aaPredicted RBP21.5■■□□□ 1.03
LRCH1-204ENST00000443945 ANKRD13CQ8N6S4 541 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 RUFY2Q8WXA3 655 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 P2RX7Q99572 595 aaKnown RBP21.5■■□□□ 1.03
LRCH1-204ENST00000443945 DSCC1Q9BVC3 393 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 MCOLN1Q9GZU1 580 aa21.5■■□□□ 1.03
LRCH1-204ENST00000443945 SGSM2O43147 1006 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 CTGFP29279 349 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 CHMP4CQ96CF2 233 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 C12orf42Q96LP6 360 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 RPAP3Q9H6T3 665 aaPredicted RBP21.49■■□□□ 1.03
LRCH1-204ENST00000443945 TMX2Q9Y320 296 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 BCRP11274 1271 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 PABPC4Q13310 644 aaKnown RBP eCLIP21.49■■□□□ 1.03
LRCH1-204ENST00000443945 CTU1Q7Z7A3 348 aaKnown RBP21.49■■□□□ 1.03
LRCH1-204ENST00000443945 PNMA3Q9UL41 463 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 TRIM17Q9Y577 477 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 RAD50Q92878 1312 aa21.49■■□□□ 1.03
LRCH1-204ENST00000443945 IGKV6D-41A0A0C4DH26 115 aa21.48■■□□□ 1.03
LRCH1-204ENST00000443945 TSPY2A6NKD2 308 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms