RNA–Protein interactions for RNA: ENST00000443037.1

SOX9-AS1-206, SOX9 antisense RNA 1, humanhuman

TSL 2

Gene SOX9-AS1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-206ENST00000443037 ADD2P35612 726 aa16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 GABPAQ06546 454 aa16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 CERKLQ49MI3 558 aaPredicted RBP16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 COA7Q96BR5 231 aa16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 C12orf42Q96LP6 360 aa16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 MORF4L1Q9UBU8 362 aa16.93■□□□□ 0.3
SOX9-AS1-206ENST00000443037 BAZ2AQ9UIF9 1905 aaKnown RBP16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 TNPO2O14787 897 aaKnown RBP16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 EN2P19622 333 aaPredicted RBP16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 USP14P54578 494 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 UBXN2AP68543 259 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 JAG1P78504 1218 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 PRKCZQ05513 592 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 MTMR2Q13614 643 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 USP17L2Q6R6M4 530 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 SH3TC2Q8TF17 1288 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 BOLA2Q9H3K6 86 aa16.92■□□□□ 0.3
SOX9-AS1-206ENST00000443037 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 FLT3LGP49771 235 aa16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 PLCD1P51178 756 aa16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 ECHDC1Q9NTX5 307 aa16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 SWAP70Q9UH65 585 aa16.91■□□□□ 0.3
SOX9-AS1-206ENST00000443037 GDF11O95390 407 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 GH2P01242 217 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 GJB1P08034 283 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 SHMT1P34896 483 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 IRX3P78415 501 aaPredicted RBP16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 ABCB5Q2M3G0 1257 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 MCM9Q9NXL9 1143 aa16.9■□□□□ 0.3
SOX9-AS1-206ENST00000443037 ADCY3O60266 1144 aa16.89■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
SOX9-AS1-206ENST00000443037 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
SOX9-AS1-206ENST00000443037 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GABRQQ9UN88 632 aa16.89■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GJA8P48165 433 aa16.88■□□□□ 0.29
SOX9-AS1-206ENST00000443037 HERVK_113P62684 666 aa16.88■□□□□ 0.29
SOX9-AS1-206ENST00000443037 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
SOX9-AS1-206ENST00000443037 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GPRC5AQ8NFJ5 357 aa16.88■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GJD2Q9UKL4 321 aa16.88■□□□□ 0.29
SOX9-AS1-206ENST00000443037 PLXNB2O15031 1838 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 RIOK3O14730 519 aaKnown RBP16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 PSEN1P49768 467 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 AAMPQ13685 434 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 MTFR1Q15390 333 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 CCDC17Q96LX7 622 aa16.87■□□□□ 0.29
SOX9-AS1-206ENST00000443037 XRCC5P13010 732 aaKnown RBP16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 CCL5P13501 91 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 MAPK4P31152 587 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 TMEM179Q6ZVK1 233 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 AMOTL1Q8IY63 956 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 SDR42E1Q8WUS8 393 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 RNF208Q9H0X6 261 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 ARMT1Q9H993 441 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 RABGAP1Q9Y3P9 1069 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
SOX9-AS1-206ENST00000443037 SMARCA5O60264 1052 aaPredicted RBP16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 MBD4O95243 580 aa16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 ZFYP08048 801 aaPredicted RBP16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 GUCY1A2P33402 732 aa16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 CATSPERGQ6ZRH7 1159 aa16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 TRMT44Q8IYL2 757 aaKnown RBP16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 KBTBD3Q8NAB2 608 aa16.85■□□□□ 0.29
SOX9-AS1-206ENST00000443037 SGPL1O95470 568 aa16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 RRP1P56182 461 aaKnown RBP16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 ERVK-24P63145 666 aa16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 PDAP1Q13442 181 aaKnown RBP16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 UBE2Q1Q7Z7E8 422 aa16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 SOCS4Q8WXH5 440 aa16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 FEZ1Q99689 392 aa16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 PAK6Q9NQU5 681 aaPredicted RBP16.84■□□□□ 0.29
SOX9-AS1-206ENST00000443037 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms