RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RBM8AQ9Y5S9 174 aaKnown RBP19.03■□□□□ 0.64
USP39-205ENST00000442708 U3KPZ7 1027 aaPredicted RBP19.03■□□□□ 0.64
USP39-205ENST00000442708 NEDD4P46934 1319 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 IGKV6D-41A0A0C4DH26 115 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 BTBD19C9JJ37 291 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 CYP21A2P08686 494 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 HMGCS2P54868 508 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 INHBEP58166 350 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 MTMR2Q13614 643 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 GPAT2Q6NUI2 795 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 CASC1Q6TDU7 716 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 REM2Q8IYK8 340 aaPredicted RBP19.02■□□□□ 0.64
USP39-205ENST00000442708 ZNF444Q8N0Y2 327 aaPredicted RBP19.02■□□□□ 0.64
USP39-205ENST00000442708 FAM43AQ8N2R8 423 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 AS3MTQ9HBK9 375 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 RNF186Q9NXI6 227 aa19.02■□□□□ 0.64
USP39-205ENST00000442708 MYH4Q9Y623 1939 aa19.02■□□□□ 0.63
USP39-205ENST00000442708 TFAP4Q01664 338 aa19.01■□□□□ 0.63
USP39-205ENST00000442708 IMMTQ16891 758 aaKnown RBP19.01■□□□□ 0.63
USP39-205ENST00000442708 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
USP39-205ENST00000442708 KIAA1211Q6ZU35 1233 aa19.01■□□□□ 0.63
USP39-205ENST00000442708 NEDD1Q8NHV4 660 aa19.01■□□□□ 0.63
USP39-205ENST00000442708 ZNF287Q9HBT7 754 aa19.01■□□□□ 0.63
USP39-205ENST00000442708 PLIN4Q96Q06 1357 aa19.01■□□□□ 0.63
USP39-205ENST00000442708 USP17L10C9JJH3 530 aa19■□□□□ 0.63
USP39-205ENST00000442708 BACE1P56817 501 aa19■□□□□ 0.63
USP39-205ENST00000442708 ZYXQ15942 572 aaKnown RBP19■□□□□ 0.63
USP39-205ENST00000442708 RRP12Q5JTH9 1297 aaKnown RBP19■□□□□ 0.63
USP39-205ENST00000442708 GADL1Q6ZQY3 521 aa19■□□□□ 0.63
USP39-205ENST00000442708 MFSD6Q6ZSS7 791 aa19■□□□□ 0.63
USP39-205ENST00000442708 R3HDMLQ9H3Y0 253 aa19■□□□□ 0.63
USP39-205ENST00000442708 EMILIN3Q9NT22 766 aa19■□□□□ 0.63
USP39-205ENST00000442708 TSKSQ9UJT2 592 aa19■□□□□ 0.63
USP39-205ENST00000442708 FOXN1O15353 648 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 RANBP6O60518 1105 aaKnown RBP18.99■□□□□ 0.63
USP39-205ENST00000442708 NMT2O60551 498 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 TRPA1O75762 1119 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 EEF2P13639 858 aaKnown RBP18.99■□□□□ 0.63
USP39-205ENST00000442708 ICA1Q05084 483 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 KIAA1755Q5JYT7 1200 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 TREML2Q5T2D2 321 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 CEP95Q96GE4 821 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 KANSL2Q9H9L4 492 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 IL17RBQ9NRM6 502 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 TOMM22Q9NS69 142 aa18.99■□□□□ 0.63
USP39-205ENST00000442708 TSPY3P0CV98 308 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 TSPY8P0CW00 308 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 NECTIN1Q15223 517 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 STOX1Q6ZVD7 989 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 ANKRD23Q86SG2 305 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 KIAA1683Q9H0B3 1180 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 MTMR4Q9NYA4 1195 aa18.98■□□□□ 0.63
USP39-205ENST00000442708 TSPY2A6NKD2 308 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 C19orf81C9J6K1 198 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 PDHXO00330 501 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 SLC27A2O14975 620 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 TBC1D8O95759 1140 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 USP17L2Q6R6M4 530 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 FASTKD5Q7L8L6 764 aaKnown RBP18.97■□□□□ 0.63
USP39-205ENST00000442708 PROCA1Q8NCQ7 364 aaPredicted RBP18.97■□□□□ 0.63
USP39-205ENST00000442708 FEZ1Q99689 392 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
USP39-205ENST00000442708 NYAP2Q9P242 653 aa18.97■□□□□ 0.63
USP39-205ENST00000442708 B4E1Z4 1266 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 PCP11498 1178 aaKnown RBP18.96■□□□□ 0.63
USP39-205ENST00000442708 ATP2B2Q01814 1243 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 COL9A3Q14050 684 aaPredicted RBP18.96■□□□□ 0.63
USP39-205ENST00000442708 CREB3L3Q68CJ9 461 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 CLIP2Q9UDT6 1046 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 AGTPBP1Q9UPW5 1226 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 TMX2Q9Y320 296 aa18.96■□□□□ 0.63
USP39-205ENST00000442708 E7EWF7 191 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 KDM4AO75164 1064 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 CRHR2Q13324 411 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 C12orf42Q96LP6 360 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 BEGAINQ9BUH8 593 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 ARHGEF10LQ9HCE6 1279 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 ZSWIM5Q9P217 1185 aa18.95■□□□□ 0.62
USP39-205ENST00000442708 ALDH1A1P00352 501 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 HSPA8P11142 646 aaKnown RBP18.94■□□□□ 0.62
USP39-205ENST00000442708 NOVP48745 357 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
USP39-205ENST00000442708 OTUD7BQ6GQQ9 843 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 CYB5R4Q7L1T6 521 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 ESR2Q92731 530 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 ZKSCAN3Q9BRR0 538 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 CFHR5Q9BXR6 569 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 ZCCHC17Q9NP64 241 aaKnown RBP18.94■□□□□ 0.62
USP39-205ENST00000442708 TMOD4Q9NZQ9 345 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 RLFQ13129 1914 aa18.94■□□□□ 0.62
USP39-205ENST00000442708 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 CA12O43570 354 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 TTLL1O95922 423 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 CYP2C8P10632 490 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 VCAM1P19320 739 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 USP14P54578 494 aa18.93■□□□□ 0.62
USP39-205ENST00000442708 RCSD1Q6JBY9 416 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms