RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 MAPK4P31152 587 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 CACNB2Q08289 660 aaPredicted RBP10.18□□□□□ -0.78
TOP3B-209ENST00000442653 ZYXQ15942 572 aaKnown RBP10.18□□□□□ -0.78
TOP3B-209ENST00000442653 MORN1Q5T089 497 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 TATDN1Q6P1N9 297 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 GPR142Q7Z601 462 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 FTSJ3Q8IY81 847 aaKnown RBP10.18□□□□□ -0.78
TOP3B-209ENST00000442653 ACER1Q8TDN7 264 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 C11orf49Q9H6J7 331 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 IGSF3O75054 1194 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 CNMDO75829 334 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 CCND3P30281 292 aaPredicted RBP10.17□□□□□ -0.78
TOP3B-209ENST00000442653 USP5P45974 858 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 EVX2Q03828 476 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 PDE3AQ14432 1141 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 LHX8Q68G74 356 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 CEP85Q6P2H3 762 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L2Q6R6M4 530 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 C12orf42Q96LP6 360 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 FEZ1Q99689 392 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 EHD4Q9H223 541 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 SERPINB13Q9UIV8 391 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 EXOC6BQ9Y2D4 811 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 PRUNE2Q8WUY3 3088 aa10.17□□□□□ -0.78
TOP3B-209ENST00000442653 COL6A1P12109 1028 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 VCAM1P19320 739 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 BMP8BP34820 402 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 SHMT1P34896 483 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 RGS2P41220 211 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 MAGEA10P43363 369 aaPredicted RBP10.16□□□□□ -0.78
TOP3B-209ENST00000442653 PLCD1P51178 756 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 RAB3GAP1Q15042 981 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 PLEKHH3Q7Z736 793 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 AACSQ86V21 672 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 CCAR1Q8IX12 1150 aaKnown RBP10.16□□□□□ -0.78
TOP3B-209ENST00000442653 APBA2Q99767 749 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 RIOK1Q9BRS2 568 aaKnown RBP10.16□□□□□ -0.78
TOP3B-209ENST00000442653 KIAA1683Q9H0B3 1180 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 FLRT1Q9NZU1 646 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 VCANP13611 3396 aa10.16□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L15C9J2P7 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L13C9JLJ4 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L11C9JVI0 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L18D6R9N7 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L22D6RA61 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L17D6RBQ6 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L19D6RCP7 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L20D6RJB6 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 GUCY1A2P33402 732 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 HNRNPUQ00839 825 aaKnown RBP eCLIP10.15□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L24Q0WX57 530 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 MAP3K12Q12852 859 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 MAP2K5Q13163 448 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 ABCB5Q2M3G0 1257 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 CERKLQ49MI3 558 aaPredicted RBP10.15□□□□□ -0.78
TOP3B-209ENST00000442653 CATSPERGQ6ZRH7 1159 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 CERS3Q8IU89 383 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 TRMT44Q8IYL2 757 aaKnown RBP10.15□□□□□ -0.78
TOP3B-209ENST00000442653 PANK1Q8TE04 598 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 GTF3C2Q8WUA4 911 aaPredicted RBP10.15□□□□□ -0.78
TOP3B-209ENST00000442653 IL1RAPL2Q9NP60 686 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 BTBD7Q9P203 1132 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.78
TOP3B-209ENST00000442653 CDH23Q9H251 3354 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
TOP3B-209ENST00000442653 PDE6AP16499 860 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 GABPAQ06546 454 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 SEPT2Q15019 361 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 LRRC26Q2I0M4 334 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 LBX2Q6XYB7 198 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 TTC6Q86TZ1 520 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 NAV1Q8NEY1 1877 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 FRMPD3Q5JV73 1810 aa10.14□□□□□ -0.79
TOP3B-209ENST00000442653 MAGEB6P1A0A0J9YX57 407 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 A0A1W2PRG0 241 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 IGHA2P01877 340 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 HOXC6P09630 235 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 PTPREP23469 700 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 USP14P54578 494 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 CCNA1P78396 465 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 GRB14Q14449 540 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 KIAA1755Q5JYT7 1200 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 SLC9C2Q5TAH2 1124 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 WDR78Q5VTH9 848 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 TMED8Q6PL24 325 aaPredicted RBP10.13□□□□□ -0.79
TOP3B-209ENST00000442653 Q7L0L9 218 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 ERC1Q8IUD2 1116 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 TDHQ8IZJ6 230 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 SLC44A5Q8NCS7 719 aa10.13□□□□□ -0.79
TOP3B-209ENST00000442653 EDC3Q96F86 508 aaKnown RBP10.13□□□□□ -0.79
TOP3B-209ENST00000442653 RPAP3Q9H6T3 665 aaPredicted RBP10.13□□□□□ -0.79
TOP3B-209ENST00000442653 CWC22Q9HCG8 908 aaKnown RBP10.13□□□□□ -0.79
TOP3B-209ENST00000442653 RLFQ13129 1914 aa10.12□□□□□ -0.79
TOP3B-209ENST00000442653 TCRBV5S4A2TA0A5A2 114 aa10.12□□□□□ -0.79
TOP3B-209ENST00000442653 SLC15A5A6NIM6 579 aa10.12□□□□□ -0.79
TOP3B-209ENST00000442653 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
TOP3B-209ENST00000442653 SMIM22K7EJ46 135 aa10.12□□□□□ -0.79
TOP3B-209ENST00000442653 GOLIM4O00461 696 aa10.12□□□□□ -0.79
TOP3B-209ENST00000442653 GLRX3O76003 335 aaKnown RBP10.12□□□□□ -0.79
TOP3B-209ENST00000442653 POLR3DP05423 398 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms