RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
MCF2L-218ENST00000442625 RNF225M0QZC1 329 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-218ENST00000442625 SGMS1Q86VZ5 419 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
MCF2L-218ENST00000442625 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 RSPH14Q9UHP6 348 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 ABCC12Q96J65 1359 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 MAP2K7O14733 419 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 MAFGO15525 162 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 MMP1P03956 469 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 FXR1P51114 621 aaKnown RBP eCLIP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 VSNL1P62760 191 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 GIGYF2Q6Y7W6 1299 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 NUTM2AQ8IVF1 878 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 TFR2Q9UP52 801 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 GOLGA6L9A6NEM1 432 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 SARSP49591 514 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 MUM1L1Q5H9M0 696 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 JAKMIP3Q5VZ66 844 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 APTXQ7Z2E3 356 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 PIGBQ92521 554 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 ACTN4O43707 911 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 NOA1Q8NC60 698 aaKnown RBP16.03■□□□□ 0.16
MCF2L-218ENST00000442625 HINFPQ9BQA5 517 aa16.03■□□□□ 0.16
MCF2L-218ENST00000442625 WNT7AO00755 349 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 PTPREP23469 700 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 RASGRF1Q13972 1273 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 NCAPH2Q6IBW4 605 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 MLKLQ8NB16 471 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 SPATA5Q8NB90 893 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 AK7Q96M32 723 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 TRIM10Q9UDY6 481 aa16.02■□□□□ 0.16
MCF2L-218ENST00000442625 UBR2Q8IWV8 1755 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 A0A1B0GTH6 734 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 KIF5CO60282 957 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 DPYDQ12882 1025 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 NOM1Q5C9Z4 860 aaKnown RBP16.02■□□□□ 0.15
MCF2L-218ENST00000442625 EARS2Q5JPH6 523 aaKnown RBP16.02■□□□□ 0.15
MCF2L-218ENST00000442625 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 CCDC102AQ96A19 550 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 CDC23Q9UJX2 597 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 AKAP11Q9UKA4 1901 aa16.02■□□□□ 0.15
MCF2L-218ENST00000442625 ATRNO75882 1429 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 IFNAR1P17181 557 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 LIFRP42702 1097 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 TDO2P48775 406 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 RTN1Q16799 776 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 GSG1L2A8MUP6 293 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 PLCD1P51178 756 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 EXOC4Q96A65 974 aa16.01■□□□□ 0.15
MCF2L-218ENST00000442625 ARID4AP29374 1257 aaPredicted RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 TNNT3P45378 269 aaPredicted RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 WTAPQ15007 396 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 BRD3Q15059 726 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 SHISA4Q96DD7 197 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 RASSF4Q9H2L5 321 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 HOOK1Q9UJC3 728 aaKnown RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 RRP15Q9Y3B9 282 aaKnown RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 PARP4Q9UKK3 1724 aaKnown RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 PRDM1O75626 825 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 STARD3NLO95772 234 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 GYPCP04921 128 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 ACTN2P35609 894 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 EVA1CP58658 441 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 GOLGA5Q8TBA6 731 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 ZNF512BQ96KM6 892 aaPredicted RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 VPS16Q9H269 839 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 BLZF1Q9H2G9 400 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 L1RE1Q9UN81 338 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 IQSEC3Q9UPP2 1182 aaPredicted RBP16■□□□□ 0.15
MCF2L-218ENST00000442625 MAPK8IP1Q9UQF2 711 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 MYH7P12883 1935 aa16■□□□□ 0.15
MCF2L-218ENST00000442625 ECM29Q5VYK3 1845 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 LRRIQ3A6PVS8 624 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-218ENST00000442625 ENC1O14682 589 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 ERVK-24P63145 666 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 PUM3Q15397 648 aaKnown RBP15.99■□□□□ 0.15
MCF2L-218ENST00000442625 NT5DC1Q5TFE4 455 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 SLF1Q9BQI6 1058 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 CDHR2Q9BYE9 1310 aa15.99■□□□□ 0.15
MCF2L-218ENST00000442625 MFAP3LO75121 409 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms