RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 PALM2Q8IXS6 379 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 TMEM63CQ9P1W3 806 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 CROTQ9UKG9 612 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 RWDD3Q9Y3V2 267 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 CAPN15O75808 1086 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 SERPINB4P48594 390 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 SNX16P57768 344 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 LRMPQ12912 555 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 NDUFA5Q16718 116 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 NXNQ6DKJ4 435 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 PPP1R42Q7Z4L9 355 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 NDUFAF2Q8N183 169 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 LRRC45Q96CN5 670 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 CFAP36Q96G28 342 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 AGBL1Q96MI9 1066 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 NEUROD6Q96NK8 337 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 FHDC1Q9C0D6 1143 aaPredicted RBP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ANTXR1Q9H6X2 564 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC87Q9NVE4 849 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ANKIB1Q9P2G1 1089 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 SNX2O60749 519 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 LMNAP02545 664 aaKnown RBP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 POTEJP0CG39 1038 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 LONP1P36776 959 aaKnown RBP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ATP1A2P50993 1020 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ZNF75DP51815 510 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 MRPL12P52815 198 aaKnown RBP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 TBC1D8BQ0IIM8 1120 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 RALGDSQ12967 914 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 KIF22Q14807 665 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 HABP4Q5JVS0 413 aaKnown RBP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 NUGGCQ68CJ6 796 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 PABPN1Q86U42 306 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 IQUBQ8NA54 791 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 SCAND2PQ9GZW5 306 aaPredicted RBP6.19□□□□□ -1.42
PTPRC-209ENST00000442510 AS3MTQ9HBK9 375 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 TMCO1Q9UM00 188 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ATP11BQ9Y2G3 1177 aa6.19□□□□□ -1.42
PTPRC-209ENST00000442510 ARHGAP10A1A4S6 786 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 N4BP3O15049 544 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 CIB2O75838 187 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 PRLP01236 227 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 GSTA2P09210 222 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 SMTNP53814 917 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 LMNB2Q03252 620 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TYRO3Q06418 890 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 FXNQ16595 210 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TJAP1Q5JTD0 557 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC13Q8IYE1 715 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ARHGAP24Q8N264 748 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TRIM63Q969Q1 353 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 KLHL29Q96CT2 875 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 IL17RAQ96F46 866 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ATP6V1HQ9UI12 483 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 CAPN11Q9UMQ6 739 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TRIM43BA6NCK2 446 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 RHOBTB1O94844 696 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 POLR2EP19388 210 aaKnown RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 NFKBIAP25963 317 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 RAP1GDS1P52306 607 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ZBTB41Q5SVQ8 909 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TMC5Q6UXY8 1006 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ATF7IPQ6VMQ6 1270 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 KRT27Q7Z3Y8 459 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ZNF554Q86TJ5 538 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ZC3H18Q86VM9 953 aaKnown RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 P3H4Q92791 437 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TBC1D23Q9NUY8 699 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 KLHL42Q9P2K6 505 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ANKRD30AQ9BXX3 1397 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TMEM110-MUSTN1A8MSY1 372 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ATP2A2P16615 1042 aaKnown RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 HSPA1LP34931 641 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 MRPS15P82914 257 aaKnown RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC93Q567U6 631 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 NFRKBQ6P4R8 1299 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ANO5Q75V66 913 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 USP48Q86UV5 1035 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 PDZD8Q8NEN9 1154 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 MCUR1Q96AQ8 359 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 UBN1Q9NPG3 1134 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 HACD3Q9P035 362 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 SERPINA10Q9UK55 444 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ZKSCAN1P17029 563 aaPredicted RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 DDX5P17844 614 aaKnown RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 IGHMBP2P38935 993 aaKnown RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ITGA7Q13683 1181 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 LRRC31Q6UY01 552 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 TBC1D1Q86TI0 1168 aaPredicted RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 ELOA2Q8IYF1 753 aaPredicted RBP6.18□□□□□ -1.42
PTPRC-209ENST00000442510 CCDC89Q8N998 374 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 GALNT6Q8NCL4 622 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 APPBP2Q92624 585 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 RILPL2Q969X0 211 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 Q9H521 79 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 SLC40A1Q9NP59 571 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 GPCPD1Q9NPB8 672 aa6.18□□□□□ -1.42
PTPRC-209ENST00000442510 DLGAP2Q9P1A6 1054 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms