RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 SH2D4AQ9H788 454 aa13.4□□□□□ -0.26
NELFE-205ENST00000441998 RBPJLQ9UBG7 517 aa13.4□□□□□ -0.26
NELFE-205ENST00000441998 ARPP21Q9UBL0 812 aaPredicted RBP13.4□□□□□ -0.26
NELFE-205ENST00000441998 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
NELFE-205ENST00000441998 GJD2Q9UKL4 321 aa13.4□□□□□ -0.26
NELFE-205ENST00000441998 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
NELFE-205ENST00000441998 SLC4A4Q9Y6R1 1079 aa13.4□□□□□ -0.26
NELFE-205ENST00000441998 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 USP17L21D6R901 530 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 CCNA1P78396 465 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 HOXC10Q9NYD6 342 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
NELFE-205ENST00000441998 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
NELFE-205ENST00000441998 PRKAB2O43741 272 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 CCL5P13501 91 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 VCAM1P19320 739 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 CDK8P49336 464 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 ERVK-24P63145 666 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 SEPT2Q15019 361 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 SHROOM1Q2M3G4 852 aaPredicted RBP13.38□□□□□ -0.27
NELFE-205ENST00000441998 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 ZNF287Q9HBT7 754 aa13.38□□□□□ -0.27
NELFE-205ENST00000441998 PHIPQ8WWQ0 1821 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 MX1P20591 662 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 COG2Q14746 738 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 MTFR1Q15390 333 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
NELFE-205ENST00000441998 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 PI4K2BQ8TCG2 481 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 ARHGEF10LQ9HCE6 1279 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
NELFE-205ENST00000441998 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 PATL2C9JE40 543 aaKnown RBP13.36□□□□□ -0.27
NELFE-205ENST00000441998 MPHOSPH10O00566 681 aaKnown RBP13.36□□□□□ -0.27
NELFE-205ENST00000441998 SGPL1O95470 568 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 HMGCRP04035 888 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 USP6NLQ92738 828 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 TXNRD2Q9NNW7 524 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 PAK6Q9NQU5 681 aaPredicted RBP13.36□□□□□ -0.27
NELFE-205ENST00000441998 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
NELFE-205ENST00000441998 LOC285556D6RIA3 1793 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 A0A1W2PRG0 241 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 INHAP05111 366 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 CYP2D6P10635 497 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 Q3C1V9 767 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 PLEKHH3Q7Z736 793 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 U2AF1L4Q8WU68 220 aaKnown RBP13.35□□□□□ -0.27
NELFE-205ENST00000441998 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
NELFE-205ENST00000441998 RPAP3Q9H6T3 665 aaPredicted RBP13.35□□□□□ -0.27
NELFE-205ENST00000441998 CENPFP49454 3210 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
NELFE-205ENST00000441998 TNRC18O15417 2968 aaPredicted RBP13.35□□□□□ -0.27
NELFE-205ENST00000441998 GPAA1O43292 621 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 STRNO43815 780 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
NELFE-205ENST00000441998 AKR1B1P15121 316 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 RGS2P41220 211 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 ICA1Q05084 483 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 ZMYM1Q5SVZ6 1142 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 MORN1Q5T089 497 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 ANKRD45Q5TZF3 282 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 GPR142Q7Z601 462 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 ANKLE1Q8NAG6 615 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 SLC44A5Q8NCS7 719 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 SHCBP1Q8NEM2 672 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 EVI5LQ96CN4 794 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 UNC93B1Q9H1C4 597 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 PTPRFP10586 1907 aa13.34□□□□□ -0.27
NELFE-205ENST00000441998 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.27
NELFE-205ENST00000441998 SLC15A5A6NIM6 579 aa13.33□□□□□ -0.28
NELFE-205ENST00000441998 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
NELFE-205ENST00000441998 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
NELFE-205ENST00000441998 CNMDO75829 334 aa13.33□□□□□ -0.28
NELFE-205ENST00000441998 CHGBP05060 677 aa13.33□□□□□ -0.28
NELFE-205ENST00000441998 HOXC6P09630 235 aa13.33□□□□□ -0.28
NELFE-205ENST00000441998 ELNP15502 786 aa13.33□□□□□ -0.28
NELFE-205ENST00000441998 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
NELFE-205ENST00000441998 MAP3K21Q5TCX8 1036 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms