RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 SEPT2Q15019 361 aa32.65■■■□□ 2.82
MRPL28-204ENST00000441883 Q3C1V9 767 aa32.65■■■□□ 2.82
MRPL28-204ENST00000441883 GPRC5AQ8NFJ5 357 aa32.65■■■□□ 2.82
MRPL28-204ENST00000441883 NKX2-3Q8TAU0 364 aa32.65■■■□□ 2.82
MRPL28-204ENST00000441883 FEZ1Q99689 392 aa32.65■■■□□ 2.82
MRPL28-204ENST00000441883 SMIM22K7EJ46 135 aa32.64■■■□□ 2.82
MRPL28-204ENST00000441883 SLC44A5Q8NCS7 719 aa32.64■■■□□ 2.82
MRPL28-204ENST00000441883 TAOK2Q9UL54 1235 aa32.64■■■□□ 2.82
MRPL28-204ENST00000441883 USP14P54578 494 aa32.63■■■□□ 2.81
MRPL28-204ENST00000441883 DYNLL2Q96FJ2 89 aa32.63■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L15C9J2P7 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L13C9JLJ4 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L11C9JVI0 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L18D6R9N7 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L22D6RA61 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L17D6RBQ6 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L19D6RCP7 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L20D6RJB6 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L24Q0WX57 530 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 UBE2Q1Q7Z7E8 422 aa32.62■■■□□ 2.81
MRPL28-204ENST00000441883 U2AF1L4Q8WU68 220 aaKnown RBP32.62■■■□□ 2.81
MRPL28-204ENST00000441883 PUS7LQ9H0K6 701 aaKnown RBP32.62■■■□□ 2.81
MRPL28-204ENST00000441883 C12orf60Q5U649 245 aa32.61■■■□□ 2.81
MRPL28-204ENST00000441883 ZSCAN25Q6NSZ9 544 aa32.61■■■□□ 2.81
MRPL28-204ENST00000441883 CATSPERGQ6ZRH7 1159 aa32.61■■■□□ 2.81
MRPL28-204ENST00000441883 SWAP70Q9UH65 585 aa32.61■■■□□ 2.81
MRPL28-204ENST00000441883 CYP2D7A0A087X1C5 515 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 A0A1W2PRG0 241 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 SGPL1O95470 568 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 VCAM1P19320 739 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 ERVK-9P63128 1117 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 ERVK-24P63145 666 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 TSHZ3Q63HK5 1081 aa32.6■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L12C9JPN9 530 aa32.59■■■□□ 2.81
MRPL28-204ENST00000441883 USP17L21D6R901 530 aa32.59■■■□□ 2.81
MRPL28-204ENST00000441883 RRP1P56182 461 aaKnown RBP32.59■■■□□ 2.81
MRPL28-204ENST00000441883 GTF3C2Q8WUA4 911 aaPredicted RBP32.59■■■□□ 2.81
MRPL28-204ENST00000441883 PAGR1Q9BTK6 254 aa32.59■■■□□ 2.81
MRPL28-204ENST00000441883 PORCNQ9H237 461 aa32.59■■■□□ 2.81
MRPL28-204ENST00000441883 MPHOSPH10O00566 681 aaKnown RBP32.58■■■□□ 2.81
MRPL28-204ENST00000441883 CNMDO75829 334 aa32.58■■■□□ 2.81
MRPL28-204ENST00000441883 KBTBD3Q8NAB2 608 aa32.58■■■□□ 2.81
MRPL28-204ENST00000441883 PAK6Q9NQU5 681 aaPredicted RBP32.58■■■□□ 2.81
MRPL28-204ENST00000441883 SLC4A4Q9Y6R1 1079 aa32.58■■■□□ 2.81
MRPL28-204ENST00000441883 MYH8P13535 1937 aa32.57■■■□□ 2.81
MRPL28-204ENST00000441883 CEP290O15078 2479 aa32.57■■■□□ 2.8
MRPL28-204ENST00000441883 SIAH1Q8IUQ4 282 aa32.57■■■□□ 2.8
MRPL28-204ENST00000441883 MAPK4P31152 587 aa32.56■■■□□ 2.8
MRPL28-204ENST00000441883 TMEM179Q6ZVK1 233 aa32.56■■■□□ 2.8
MRPL28-204ENST00000441883 DEFB118Q96PH6 123 aa32.56■■■□□ 2.8
MRPL28-204ENST00000441883 STRBPQ96SI9 672 aaKnown RBP32.56■■■□□ 2.8
MRPL28-204ENST00000441883 RABGAP1Q9Y3P9 1069 aa32.56■■■□□ 2.8
MRPL28-204ENST00000441883 HMGCRP04035 888 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 AKR1B1P15121 316 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 CYP2B6P20813 491 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 CDK8P49336 464 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 TRIM32Q13049 653 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 LBX2Q6XYB7 198 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 USP6NLQ92738 828 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 GPATCH3Q96I76 525 aa32.55■■■□□ 2.8
MRPL28-204ENST00000441883 RPAP3Q9H6T3 665 aaPredicted RBP32.55■■■□□ 2.8
MRPL28-204ENST00000441883 CTR9Q6PD62 1173 aa32.54■■■□□ 2.8
MRPL28-204ENST00000441883 NUDT12Q9BQG2 462 aa32.54■■■□□ 2.8
MRPL28-204ENST00000441883 KIAA1755Q5JYT7 1200 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 C16orf86Q6ZW13 317 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 GPR142Q7Z601 462 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 CLEC10AQ8IUN9 316 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 TRIB2Q92519 343 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 OSBP2Q969R2 916 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 CRISPLD2Q9H0B8 497 aa32.53■■■□□ 2.8
MRPL28-204ENST00000441883 XRCC5P13010 732 aaKnown RBP32.52■■■□□ 2.8
MRPL28-204ENST00000441883 MORN1Q5T089 497 aa32.52■■■□□ 2.8
MRPL28-204ENST00000441883 OTUD7AQ8TE49 926 aaPredicted RBP32.52■■■□□ 2.8
MRPL28-204ENST00000441883 SOCS4Q8WXH5 440 aa32.52■■■□□ 2.8
MRPL28-204ENST00000441883 CCDC17Q96LX7 622 aa32.52■■■□□ 2.8
MRPL28-204ENST00000441883 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.52■■■□□ 2.8
MRPL28-204ENST00000441883 BTBD7Q9P203 1132 aa32.52■■■□□ 2.8
MRPL28-204ENST00000441883 SPDYE16A6NNV3 312 aaPredicted RBP32.51■■■□□ 2.79
MRPL28-204ENST00000441883 RNF113AO15541 343 aaKnown RBP32.51■■■□□ 2.79
MRPL28-204ENST00000441883 PLEKHH3Q7Z736 793 aa32.51■■■□□ 2.79
MRPL28-204ENST00000441883 DDRGK1Q96HY6 314 aa32.51■■■□□ 2.79
MRPL28-204ENST00000441883 RLFQ13129 1914 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 GSG1L2A8MUP6 293 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 FARP2O94887 1054 aaPredicted RBP32.5■■■□□ 2.79
MRPL28-204ENST00000441883 TFRCP02786 760 aaKnown RBP32.5■■■□□ 2.79
MRPL28-204ENST00000441883 CCAR1Q8IX12 1150 aaKnown RBP32.5■■■□□ 2.79
MRPL28-204ENST00000441883 AMOTL1Q8IY63 956 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 PI4K2BQ8TCG2 481 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 APPBP2Q92624 585 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 GCC1Q96CN9 775 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 CRBNQ96SW2 442 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 TMX2Q9Y320 296 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 TTC41PQ6P2S7 1318 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 RPTORQ8N122 1335 aa32.5■■■□□ 2.79
MRPL28-204ENST00000441883 CAPN2P17655 700 aa32.49■■■□□ 2.79
MRPL28-204ENST00000441883 H0YGN5 161 aa32.48■■■□□ 2.79
MRPL28-204ENST00000441883 MAP3K21Q5TCX8 1036 aa32.48■■■□□ 2.79
MRPL28-204ENST00000441883 HMX1Q9NP08 348 aaPredicted RBP32.48■■■□□ 2.79
MRPL28-204ENST00000441883 ZFYP08048 801 aaPredicted RBP32.47■■■□□ 2.79
MRPL28-204ENST00000441883 CCNA1P78396 465 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms