RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 SNX17Q15036 470 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 GJC2Q5T442 439 aaPredicted RBP12.3□□□□□ -0.44
SYN3-204ENST00000441821 GORABQ5T7V8 394 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 LBX2Q6XYB7 198 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 NPLOC4Q8TAT6 608 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 AATFQ9NY61 560 aaKnown RBP eCLIP12.3□□□□□ -0.44
SYN3-204ENST00000441821 NDUFB9Q9Y6M9 179 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
SYN3-204ENST00000441821 IVNS1ABPQ9Y6Y0 642 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 RLFQ13129 1914 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 FLT1P17948 1338 aa12.3□□□□□ -0.44
SYN3-204ENST00000441821 E9PSI1 815 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 SRGAP3O43295 1099 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 CYBAP13498 195 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 CYP2C19P33261 490 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 MCAMP43121 646 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
SYN3-204ENST00000441821 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 PRDM5Q9NQX1 630 aaPredicted RBP12.29□□□□□ -0.44
SYN3-204ENST00000441821 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
SYN3-204ENST00000441821 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 GH2P01242 217 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 HLA-DOAP06340 250 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 COL9A1P20849 921 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 USP14P54578 494 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 MTX1Q13505 466 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 TRIM60Q495X7 471 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 FAM9BQ8IZU0 186 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 MEIS3Q99687 375 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 FEZ1Q99689 392 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 PDLIM7Q9NR12 457 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 BTBD7Q9P203 1132 aa12.28□□□□□ -0.44
SYN3-204ENST00000441821 FOCADQ5VW36 1801 aa12.27□□□□□ -0.44
SYN3-204ENST00000441821 TRIM43BA6NCK2 446 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 SEPT4O43236 478 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 ANP32CO43423 234 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 STRNO43815 780 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 IGSF3O75054 1194 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 ZYXQ15942 572 aaKnown RBP12.27□□□□□ -0.45
SYN3-204ENST00000441821 TATDN1Q6P1N9 297 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 DPP9Q86TI2 863 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 TRIM43Q96BQ3 446 aaPredicted RBP12.27□□□□□ -0.45
SYN3-204ENST00000441821 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
SYN3-204ENST00000441821 KIAA1683Q9H0B3 1180 aa12.27□□□□□ -0.45
SYN3-204ENST00000441821 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 CDK5RAP2Q96SN8 1893 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 VCAM1P19320 739 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 ADCYAP1R1P41586 468 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 SLFN5Q08AF3 891 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
SYN3-204ENST00000441821 ADGRA1Q86SQ6 560 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
SYN3-204ENST00000441821 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
SYN3-204ENST00000441821 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
SYN3-204ENST00000441821 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
SYN3-204ENST00000441821 SPDYE16A6NNV3 312 aaPredicted RBP12.25□□□□□ -0.45
SYN3-204ENST00000441821 GNAI3P08754 354 aa12.25□□□□□ -0.45
SYN3-204ENST00000441821 ADORA2AP29274 412 aa12.25□□□□□ -0.45
SYN3-204ENST00000441821 LRRC41Q15345 812 aa12.25□□□□□ -0.45
SYN3-204ENST00000441821 ANO1Q5XXA6 986 aa12.25□□□□□ -0.45
SYN3-204ENST00000441821 RNPC3Q96LT9 517 aaKnown RBP12.25□□□□□ -0.45
SYN3-204ENST00000441821 ZNF236Q9UL36 1845 aa12.25□□□□□ -0.45
SYN3-204ENST00000441821 REV3LO60673 3130 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
SYN3-204ENST00000441821 ITGB8P26012 769 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 TLE2Q04725 743 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 GRIN2CQ14957 1233 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 CERKLQ49MI3 558 aaPredicted RBP12.24□□□□□ -0.45
SYN3-204ENST00000441821 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 ACER1Q8TDN7 264 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 FERMT2Q96AC1 680 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 MOV10L1Q9BXT6 1211 aaKnown RBP12.24□□□□□ -0.45
SYN3-204ENST00000441821 EHD4Q9H223 541 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 RPAP3Q9H6T3 665 aaPredicted RBP12.24□□□□□ -0.45
SYN3-204ENST00000441821 SNRKQ9NRH2 765 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 SLC5A4Q9NY91 659 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 SERPINB13Q9UIV8 391 aa12.24□□□□□ -0.45
SYN3-204ENST00000441821 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.23□□□□□ -0.45
SYN3-204ENST00000441821 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.23□□□□□ -0.45
SYN3-204ENST00000441821 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
SYN3-204ENST00000441821 COBLO75128 1261 aa12.23□□□□□ -0.45
SYN3-204ENST00000441821 CYP2E1P05181 493 aaPredicted RBP12.23□□□□□ -0.45
SYN3-204ENST00000441821 CLTBP09497 229 aa12.23□□□□□ -0.45
SYN3-204ENST00000441821 EPHB4P54760 987 aa12.23□□□□□ -0.45
SYN3-204ENST00000441821 G3BP1Q13283 466 aaKnown RBP eCLIP12.23□□□□□ -0.45
SYN3-204ENST00000441821 COG2Q14746 738 aa12.23□□□□□ -0.45
SYN3-204ENST00000441821 ABCB5Q2M3G0 1257 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms