RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 METAP2P50579 478 aaKnown RBP eCLIP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 EXOSC10Q01780 885 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 NR1I3Q14994 352 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 PTPROQ16827 1216 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 KSR2Q6VAB6 950 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 ARHGEF25Q86VW2 580 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 MIEF2Q96C03 454 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 KLC4Q9NSK0 619 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 HAUS2Q9NVX0 235 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 DMGDHQ9UI17 866 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 TTF2Q9UNY4 1162 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 ZNF330Q9Y3S2 320 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 ENO4A6NNW6 628 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 TSR1Q2NL82 804 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC40Q4G0X9 1142 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 MAATS1Q7Z4T9 603 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 CALR3Q96L12 384 aaKnown RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 ALDH8A1Q9H2A2 487 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 PAG1Q9NWQ8 432 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 BAIAP2L1Q9UHR4 511 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC189A1A4V9 331 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 HGSO14964 777 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 CHUKO15111 745 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 KIF1CO43896 1103 aaKnown RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 HSF2BPO75031 334 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 ARHGAP25P42331 645 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 UBXN1Q04323 297 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 NEXNQ0ZGT2 675 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC70Q6NSX1 233 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 LRRC59Q96AG4 307 aaKnown RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 ZNF594Q96JF6 807 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 ZKSCAN3Q9BRR0 538 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 LRRC1Q9BTT6 524 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 IFIT1P09914 478 aaKnown RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 NR5A1Q13285 461 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 NNTQ13423 1086 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC181Q5TID7 509 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 RRAGBQ5VZM2 374 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 NME8Q8N427 588 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 THOC1Q96FV9 657 aaKnown RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 RNPC3Q96LT9 517 aaKnown RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 PANX2Q96RD6 677 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 DACH1Q9UI36 760 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 EPN1Q9Y6I3 576 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-214ENST00000441542 DIP2CQ9Y2E4 1556 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 MAST3O60307 1309 aa8.45□□□□□ -1.06
HDAC9-214ENST00000441542 MEFVO15553 781 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CSB-PGBD3P0DP91 1061 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ATP5JP18859 108 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 IMMTQ16891 758 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 RASGRP2Q7LDG7 609 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 KBTBD3Q8NAB2 608 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 EPSTI1Q96J88 318 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC43Q96MW1 224 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 TACO1Q9BSH4 297 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 SLC40A1Q9NP59 571 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ZSCAN5CA6NGD5 496 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 IPO7O95373 1038 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ZNF18P17022 549 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 IARSP41252 1262 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 TTMPQ5BVD1 217 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 RESP18Q5W5W9 173 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CCNI2Q6ZMN8 369 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC121Q6ZUS5 278 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CNGA4Q8IV77 575 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CCDC13Q8IYE1 715 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 MLKLQ8NB16 471 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 NKX2-3Q8TAU0 364 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ENOX1Q8TC92 643 aaKnown RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 OSBP2Q969R2 916 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 PCDHB6Q9Y5E3 794 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ARHGEF10O15013 1369 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 GRIN2DO15399 1336 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 SALL1Q9NSC2 1324 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 FAM205CA6NFA0 338 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 GOLGA8AA7E2F4 631 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 NCK2O43639 380 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 KIF4AO95239 1232 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CCNHP51946 323 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ODF2Q5BJF6 829 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ARMC3Q5W041 872 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 CYP26C1Q6V0L0 522 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 B4GALNT4Q76KP1 1039 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms