RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 CTCFLQ8NI51 663 aaPredicted RBP19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 CCDC17Q96LX7 622 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 SLC26A6Q9BXS9 759 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 SCAND2PQ9GZW5 306 aaPredicted RBP19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 ELP1O95163 1332 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 KIF5BP33176 963 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 SHMT1P34896 483 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 DLGAP5Q15398 846 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 TMTC3Q6ZXV5 915 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 NLGN2Q8NFZ4 835 aa19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 ZBED3Q96IU2 234 aaPredicted RBP19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 ZBTB12Q9Y330 459 aaPredicted RBP19.76■□□□□ 0.75
TMEM39B-203ENST00000441402 IGKV6D-41A0A0C4DH26 115 aa19.75■□□□□ 0.75
TMEM39B-203ENST00000441402 RPS12P25398 132 aaKnown RBP19.75■□□□□ 0.75
TMEM39B-203ENST00000441402 GSE1Q14687 1217 aa19.75■□□□□ 0.75
TMEM39B-203ENST00000441402 TMEM47Q9BQJ4 181 aa19.75■□□□□ 0.75
TMEM39B-203ENST00000441402 CFAP45Q9UL16 551 aa19.75■□□□□ 0.75
TMEM39B-203ENST00000441402 DDTLA6NHG4 134 aaPredicted RBP19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 FZD9O00144 591 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 TOP1P11387 765 aaKnown RBP19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 GNAQP50148 359 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 GRM4Q14833 912 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 KRT40Q6A162 431 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 FAM173BQ6P4H8 233 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 SH3BP5LQ7L8J4 393 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 BRAPQ7Z569 592 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 GDPD2Q9HCC8 539 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 TMOD2Q9NZR1 351 aa19.74■□□□□ 0.75
TMEM39B-203ENST00000441402 NCLP19338 710 aaKnown RBP19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 CACNB3P54284 484 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 GUCY1B3Q02153 619 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 TCP10Q12799 353 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 SPDYE2Q495Y8 402 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 PPP4R3BQ5MIZ7 849 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 GPT2Q8TD30 523 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 CEP95Q96GE4 821 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 AIFM3Q96NN9 605 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 MTMR4Q9NYA4 1195 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 ZNF70Q9UC06 446 aaPredicted RBP19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 STX8Q9UNK0 236 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 SIPA1L1O43166 1804 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 MYH8P13535 1937 aa19.73■□□□□ 0.75
TMEM39B-203ENST00000441402 ZNF280AP59817 542 aaPredicted RBP19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 UBE2HP62256 183 aa19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 AKAP17AQ02040 695 aaKnown RBP19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 KIF23Q02241 960 aaPredicted RBP19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 TRIM29Q14134 588 aa19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 OTUD7BQ6GQQ9 843 aa19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 TATDN1Q6P1N9 297 aa19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 DPF2Q92785 391 aa19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 ZNF396Q96N95 335 aaPredicted RBP19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 RBM27Q9P2N5 1060 aaKnown RBP19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 MYH15Q9Y2K3 1946 aa19.72■□□□□ 0.75
TMEM39B-203ENST00000441402 FIBPO43427 364 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 PLEKHA8P1O95397 391 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 AKR1B1P15121 316 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 U2AF2P26368 475 aaKnown RBP eCLIP19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 GUCY1A2P33402 732 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 FOSBP53539 338 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 PKN1Q16512 942 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 CMTR1Q8N1G2 835 aaKnown RBP19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 SRBD1Q8N5C6 995 aaKnown RBP19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 FAM151AQ8WW52 585 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 LZTS2Q9BRK4 669 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 GJB4Q9NTQ9 266 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 GREB1LQ9C091 1923 aaPredicted RBP19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 PALM3A6NDB9 673 aaPredicted RBP19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 SMARCA1P28370 1054 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 PRELPP51888 382 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 FAM83AQ86UY5 434 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 CCDC82Q8N4S0 544 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 DNAJC18Q9H819 358 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 MAD2L2Q9UI95 211 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 RCOR1Q9UKL0 485 aa19.71■□□□□ 0.75
TMEM39B-203ENST00000441402 MYH6P13533 1939 aa19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 CNTNAP5Q8WYK1 1306 aa19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 GADD45BO75293 160 aaPredicted RBP19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 XBP1P17861 261 aa19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 EIF6P56537 245 aaKnown RBP19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 ZSCAN29Q8IWY8 852 aaPredicted RBP19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 LEO1Q8WVC0 666 aaPredicted RBP19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 TFIP11Q9UBB9 837 aaKnown RBP19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 V9GY48 417 aaPredicted RBP19.7■□□□□ 0.74
TMEM39B-203ENST00000441402 UBE2Q2LH0YL09 131 aa19.69■□□□□ 0.74
TMEM39B-203ENST00000441402 TTLL1O95922 423 aa19.69■□□□□ 0.74
TMEM39B-203ENST00000441402 MMP1P03956 469 aa19.69■□□□□ 0.74
TMEM39B-203ENST00000441402 RASSF7Q02833 373 aa19.69■□□□□ 0.74
TMEM39B-203ENST00000441402 SPATA32Q96LK8 384 aa19.69■□□□□ 0.74
TMEM39B-203ENST00000441402 HERC5Q9UII4 1024 aaKnown RBP19.69■□□□□ 0.74
TMEM39B-203ENST00000441402 WNT10BO00744 389 aa19.68■□□□□ 0.74
TMEM39B-203ENST00000441402 MYO1BO43795 1136 aa19.68■□□□□ 0.74
TMEM39B-203ENST00000441402 CERKLQ49MI3 558 aaPredicted RBP19.68■□□□□ 0.74
TMEM39B-203ENST00000441402 MYSM1Q5VVJ2 828 aa19.68■□□□□ 0.74
TMEM39B-203ENST00000441402 MYOZ2Q9NPC6 264 aa19.68■□□□□ 0.74
TMEM39B-203ENST00000441402 KIF28PB7ZC32 967 aa19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 SAFBQ15424 915 aaKnown RBP eCLIP19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 FAM177A1Q8N128 213 aaPredicted RBP19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 STAG2Q8N3U4 1231 aa19.67■□□□□ 0.74
TMEM39B-203ENST00000441402 MKL1Q969V6 931 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms