RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 AIFM3Q96NN9 605 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 MCM9Q9NXL9 1143 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 JAG2Q9Y219 1238 aa15.24■□□□□ 0.03
ACTN4-204ENST00000440400 PPP6R2O75170 966 aa15.23■□□□□ 0.03
ACTN4-204ENST00000440400 HDLBPQ00341 1268 aaKnown RBP15.23■□□□□ 0.03
ACTN4-204ENST00000440400 GABPAQ06546 454 aa15.23■□□□□ 0.03
ACTN4-204ENST00000440400 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
ACTN4-204ENST00000440400 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
ACTN4-204ENST00000440400 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
ACTN4-204ENST00000440400 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.23■□□□□ 0.03
ACTN4-204ENST00000440400 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
ACTN4-204ENST00000440400 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
ACTN4-204ENST00000440400 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 RASA1P20936 1047 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 USP5P45974 858 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 CNKSR1Q969H4 720 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 H0YIN7 160 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 SLC39A14Q15043 492 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 TRIM22Q8IYM9 498 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 PHF20Q9BVI0 1012 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
ACTN4-204ENST00000440400 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 CLIC4Q9Y696 253 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 ARFGEF1Q9Y6D6 1849 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
ACTN4-204ENST00000440400 ANO1Q5XXA6 986 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 GJB4Q9NTQ9 266 aa15.22■□□□□ 0.03
ACTN4-204ENST00000440400 PLCD1P51178 756 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 GRM4Q14833 912 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 TGFBRAP1Q8WUH2 860 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 TNFRSF25Q93038 417 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 ZC3H12CQ9C0D7 883 aaKnown RBP15.21■□□□□ 0.03
ACTN4-204ENST00000440400 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 PCDHA7Q9UN72 937 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 IGKV6D-41A0A0C4DH26 115 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 NR1I2O75469 434 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 EN1Q05925 392 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-204ENST00000440400 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
ACTN4-204ENST00000440400 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 GTF2IP78347 998 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 NPY5RQ15761 445 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 STRIP1Q5VSL9 837 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 TEX11Q8IYF3 940 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 FMR1NBQ8N0W7 255 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-204ENST00000440400 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 CCDC39Q9UFE4 941 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 UBE2Q2LH0YL09 131 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 CTAGE5O15320 804 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 PRDM1O75626 825 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 FAM160A1Q05DH4 1040 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 NOSTRINQ8IVI9 506 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 SLC16A10Q8TF71 515 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 DACT1Q9NYF0 836 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-204ENST00000440400 SMARCA1P28370 1054 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 KIAA2012Q0VF49 1180 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 MSL1Q68DK7 614 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 ELOA2Q8IYF1 753 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-204ENST00000440400 TOMM22Q9NS69 142 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 HPSEQ9Y251 543 aa15.2■□□□□ 0.02
ACTN4-204ENST00000440400 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.2■□□□□ 0.029e-7■■□□□ 11.6
ACTN4-204ENST00000440400 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
ACTN4-204ENST00000440400 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
ACTN4-204ENST00000440400 EHD4Q9H223 541 aa15.19■□□□□ 0.02
ACTN4-204ENST00000440400 VPS33BQ9H267 617 aa15.19■□□□□ 0.02
ACTN4-204ENST00000440400 SH3GLB2Q9NR46 395 aa15.19■□□□□ 0.02
ACTN4-204ENST00000440400 SRBD1Q8N5C6 995 aaKnown RBP15.19■□□□□ 0.02
ACTN4-204ENST00000440400 COL4A5P29400 1685 aa15.19■□□□□ 0.02
ACTN4-204ENST00000440400 SPTLC2O15270 562 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 NMT2O60551 498 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 PLEKHA8P1O95397 391 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 CDK8P49336 464 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 TOB1P50616 345 aaPredicted RBP15.18■□□□□ 0.02
ACTN4-204ENST00000440400 FOSBP53539 338 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 TFAP4Q01664 338 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 TRIM29Q14134 588 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 FAM47AQ5JRC9 791 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
ACTN4-204ENST00000440400 CCAR1Q8IX12 1150 aaKnown RBP15.18■□□□□ 0.02
ACTN4-204ENST00000440400 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 PPFIA3O75145 1194 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 CMA1P23946 247 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 MAPKAPK5Q8IW41 473 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 MAD2L2Q9UI95 211 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 MRPS27Q92552 414 aaKnown RBP15.18■□□□□ 0.02
ACTN4-204ENST00000440400 MRVI1Q9Y6F6 885 aa15.18■□□□□ 0.02
ACTN4-204ENST00000440400 PALM3A6NDB9 673 aaPredicted RBP15.17■□□□□ 0.02
ACTN4-204ENST00000440400 TSPY2A6NKD2 308 aa15.17■□□□□ 0.02
ACTN4-204ENST00000440400 PFKFB3Q16875 520 aaPredicted RBP15.17■□□□□ 0.02
ACTN4-204ENST00000440400 METTL16Q86W50 562 aaKnown RBP15.17■□□□□ 0.02
ACTN4-204ENST00000440400 TIGD1Q96MW7 591 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms