RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NKG7Q16617 165 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 SNAP47Q5SQN1 464 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 OGFOD2Q6N063 350 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 ZSWIM9Q86XI8 627 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 WFDC3Q8IUB2 231 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 MCATQ8IVS2 390 aaKnown RBP5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 CYB5D2Q8WUJ1 264 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 JARID2Q92833 1246 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 RSRP1Q9BUV0 290 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 PCDHB5Q9Y5E4 795 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 CAPN6Q9Y6Q1 641 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 WRNQ14191 1432 aaPredicted RBP eCLIP5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 NCAPD3P42695 1498 aa5.19□□□□□ -1.58
HMGB3P11-201ENST00000440127 SOGA1O94964 1423 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 FARP2O94887 1054 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 CBX7O95931 251 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 PLCG1P19174 1290 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 GBP2P32456 591 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 CDKAL1Q5VV42 579 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 FAM13CQ8NE31 585 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 XAGE3Q8WTP9 111 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 HSPA12BQ96MM6 686 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 TMEM74Q96NL1 305 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 GPATCH2Q9NW75 528 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 TJP2Q9UDY2 1190 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 U3KQE9 123 aa5.18□□□□□ -1.58
HMGB3P11-201ENST00000440127 ROBO2Q9HCK4 1378 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 H3BS24 57 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 CILPO75339 1184 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 CD96P40200 585 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 TNNI2P48788 182 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 RBM25P49756 843 aaKnown RBP5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 CAMK2GQ13555 558 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 MPP2Q14168 576 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 CWF19L2Q2TBE0 894 aaKnown RBP5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 TMEM201Q5SNT2 666 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 KSR1Q8IVT5 923 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 BCL2L13Q9BXK5 485 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 CARS2Q9HA77 564 aaKnown RBP5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 ADAMTS6Q9UKP5 1117 aa5.17□□□□□ -1.58
HMGB3P11-201ENST00000440127 GDNFP39905 211 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 RNF4P78317 190 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 SLFN12Q8IYM2 578 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 ALPK1Q96QP1 1244 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 PPP1R16BQ96T49 567 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 ASPNQ9BXN1 380 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 ASCC2Q9H1I8 757 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 ATP13A1Q9HD20 1204 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 CEP131Q9UPN4 1083 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 TLR6Q9Y2C9 796 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 ST14Q9Y5Y6 855 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 HMGXB3Q12766 1538 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 TNIKQ9UKE5 1360 aa5.16□□□□□ -1.58
HMGB3P11-201ENST00000440127 PF4P02776 101 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 CTSHP09668 335 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 ZEB1P37275 1124 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 CDK8P49336 464 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 MPZL3Q6UWV2 235 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 HS2ST1Q7LGA3 356 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 CDH24Q86UP0 819 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 BHLHE22Q8NFJ8 381 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 RNF141Q8WVD5 230 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 UBE2FQ969M7 185 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 ACSF2Q96CM8 615 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 KIRREL1Q96J84 757 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 RHOVQ96L33 236 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 FAM161BQ96MY7 647 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 DPH2Q9BQC3 489 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 SEMA3GQ9NS98 782 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 CTNND2Q9UQB3 1225 aa5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 SUPT16HQ9Y5B9 1047 aaKnown RBP5.15□□□□□ -1.59
HMGB3P11-201ENST00000440127 RUSC2Q8N2Y8 1516 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 LRRC10BA6NIK2 292 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 GLI1P08151 1106 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 TNK2Q07912 1038 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 RAD51AP2Q09MP3 1159 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 TMEM67Q5HYA8 995 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 GOLM1Q8NBJ4 401 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 DHX38Q92620 1227 aaKnown RBP5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 FAM84AQ96KN4 292 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 CCDC74BQ96LY2 380 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 ZSWIM5Q9P217 1185 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 PRR36Q9H6K5 1346 aa5.14□□□□□ -1.59
HMGB3P11-201ENST00000440127 SYNJ1O43426 1573 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 FAM221AA4D161 298 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 PRR33A8MZF0 331 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 HTR3BO95264 441 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 F13A1P00488 732 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 LTKP29376 864 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 BNC2Q6ZN30 1099 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 FAM196AQ6ZSG2 479 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 REC114Q7Z4M0 266 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 PHACTR4Q8IZ21 702 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 DNAJB8Q8NHS0 232 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 GIPC2Q8TF65 315 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 LRRC3Q9BY71 257 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 GPR62Q9BZJ7 368 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 PRDM7Q9NQW5 492 aa5.13□□□□□ -1.59
HMGB3P11-201ENST00000440127 RNF19AQ9NV58 838 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms