RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 HMGCRP04035 888 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 POLR3DP05423 398 aaPredicted RBP19.37■□□□□ 0.69
ITGB1-207ENST00000439974 PLCD1P51178 756 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 ABCB5Q2M3G0 1257 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 CERKLQ49MI3 558 aaPredicted RBP19.37■□□□□ 0.69
ITGB1-207ENST00000439974 SMC5Q8IY18 1101 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 C12orf42Q96LP6 360 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 DEFB118Q96PH6 123 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 TXNRD2Q9NNW7 524 aa19.37■□□□□ 0.69
ITGB1-207ENST00000439974 USP14P54578 494 aa19.36■□□□□ 0.69
ITGB1-207ENST00000439974 RAB3GAP1Q15042 981 aa19.36■□□□□ 0.69
ITGB1-207ENST00000439974 GPATCH3Q96I76 525 aa19.36■□□□□ 0.69
ITGB1-207ENST00000439974 CABP5Q9NP86 173 aa19.36■□□□□ 0.69
ITGB1-207ENST00000439974 PLXNB2O15031 1838 aa19.36■□□□□ 0.69
ITGB1-207ENST00000439974 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 TFRCP02786 760 aaKnown RBP19.35■□□□□ 0.69
ITGB1-207ENST00000439974 SHMT1P34896 483 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 ERVK-9P63128 1117 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 ERVK-24P63145 666 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 ZYXQ15942 572 aaKnown RBP19.35■□□□□ 0.69
ITGB1-207ENST00000439974 SOCS4Q8WXH5 440 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.35■□□□□ 0.69
ITGB1-207ENST00000439974 MCM9Q9NXL9 1143 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
ITGB1-207ENST00000439974 COLQQ9Y215 455 aaPredicted RBP19.35■□□□□ 0.69
ITGB1-207ENST00000439974 SALL3Q9BXA9 1300 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L15C9J2P7 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L13C9JLJ4 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L11C9JVI0 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L18D6R9N7 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L22D6RA61 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L17D6RBQ6 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L19D6RCP7 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L20D6RJB6 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 PEX10O60683 326 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 MX1P20591 662 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 MAPK4P31152 587 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 GABPAQ06546 454 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 USP17L24Q0WX57 530 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 LCORLQ8N3X6 602 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 PI4K2BQ8TCG2 481 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 PAGR1Q9BTK6 254 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 KIAA1683Q9H0B3 1180 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 CRISPLD2Q9H0B8 497 aa19.34■□□□□ 0.69
ITGB1-207ENST00000439974 CYP2B6P20813 491 aa19.33■□□□□ 0.68
ITGB1-207ENST00000439974 Q3C1V9 767 aa19.33■□□□□ 0.68
ITGB1-207ENST00000439974 CCAR1Q8IX12 1150 aaKnown RBP19.33■□□□□ 0.68
ITGB1-207ENST00000439974 ACER1Q8TDN7 264 aa19.33■□□□□ 0.68
ITGB1-207ENST00000439974 SDR42E1Q8WUS8 393 aa19.33■□□□□ 0.68
ITGB1-207ENST00000439974 RPTORQ8N122 1335 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 VCAM1P19320 739 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 ADD2P35612 726 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 NUCB1Q02818 461 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 TRIB2Q92519 343 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.32■□□□□ 0.68
ITGB1-207ENST00000439974 HMX1Q9NP08 348 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-207ENST00000439974 DCP1AQ9NPI6 582 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-207ENST00000439974 TRIOBPQ9H2D6 2365 aa19.32■□□□□ 0.68
ITGB1-207ENST00000439974 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 XRCC5P13010 732 aaKnown RBP19.31■□□□□ 0.68
ITGB1-207ENST00000439974 GUCY1A2P33402 732 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 TRIM32Q13049 653 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 CATSPERGQ6ZRH7 1159 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 GPR142Q7Z601 462 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 PORCNQ9H237 461 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 ARMT1Q9H993 441 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 NR2E3Q9Y5X4 410 aa19.31■□□□□ 0.68
ITGB1-207ENST00000439974 MYH7P12883 1935 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 PDE1AP54750 535 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 EVX2Q03828 476 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 SEPT2Q15019 361 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 CHRDL2Q6WN34 429 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 PLEKHH3Q7Z736 793 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 TRMT44Q8IYL2 757 aaKnown RBP19.3■□□□□ 0.68
ITGB1-207ENST00000439974 ANKLE1Q8NAG6 615 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 SWAP70Q9UH65 585 aa19.3■□□□□ 0.68
ITGB1-207ENST00000439974 MPHOSPH10O00566 681 aaKnown RBP19.29■□□□□ 0.68
ITGB1-207ENST00000439974 ERC2O15083 957 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 CNMDO75829 334 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 GLRX3O76003 335 aaKnown RBP19.29■□□□□ 0.68
ITGB1-207ENST00000439974 MBD4O95243 580 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 CYP2D6P10635 497 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 RGS2P41220 211 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 FXR1P51114 621 aaKnown RBP eCLIP19.29■□□□□ 0.68
ITGB1-207ENST00000439974 CCNA1P78396 465 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 NECAB2Q7Z6G3 386 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 USP6NLQ92738 828 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 PAWRQ96IZ0 340 aaKnown RBP19.29■□□□□ 0.68
ITGB1-207ENST00000439974 CWC22Q9HCG8 908 aaKnown RBP19.29■□□□□ 0.68
ITGB1-207ENST00000439974 ATP8A2Q9NTI2 1148 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 MYH8P13535 1937 aa19.29■□□□□ 0.68
ITGB1-207ENST00000439974 BAZ2AQ9UIF9 1905 aaKnown RBP19.28■□□□□ 0.68
ITGB1-207ENST00000439974 PRKAR2AP13861 404 aaKnown RBP19.28■□□□□ 0.68
ITGB1-207ENST00000439974 ZKSCAN1P17029 563 aaPredicted RBP19.28■□□□□ 0.68
ITGB1-207ENST00000439974 UBE3CQ15386 1083 aa19.28■□□□□ 0.68
ITGB1-207ENST00000439974 MORN1Q5T089 497 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms