RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 CABP5Q9NP86 173 aa27.29■■□□□ 1.96
LONRF3-204ENST00000439603 CLEC11AQ9Y240 323 aa27.29■■□□□ 1.96
LONRF3-204ENST00000439603 PHF20L1A8MW92 1017 aa27.28■■□□□ 1.96
LONRF3-204ENST00000439603 SHROOM1Q2M3G4 852 aaPredicted RBP27.28■■□□□ 1.96
LONRF3-204ENST00000439603 USP48Q86UV5 1035 aa27.28■■□□□ 1.96
LONRF3-204ENST00000439603 CCDC83Q8IWF9 413 aa27.28■■□□□ 1.96
LONRF3-204ENST00000439603 ZNF654Q8IZM8 581 aa27.28■■□□□ 1.96
LONRF3-204ENST00000439603 HPS5Q9UPZ3 1129 aa27.28■■□□□ 1.96
LONRF3-204ENST00000439603 ZBTB43O43298 467 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 GH2P01242 217 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 ZNF526Q8TF50 670 aaPredicted RBP27.27■■□□□ 1.96
LONRF3-204ENST00000439603 GTF3C6Q969F1 213 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 KAT14Q9H8E8 782 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 POTEIP0CG38 1075 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 POTEJP0CG39 1038 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 CAP2P40123 477 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 CCT2P78371 535 aaKnown RBP27.27■■□□□ 1.96
LONRF3-204ENST00000439603 JAG1P78504 1218 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 ST3GAL1Q11201 340 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 SCRN1Q12765 414 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 DLK2Q6UY11 383 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 CDC37L1Q7L3B6 337 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 CATIPQ7Z7H3 387 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 RAB11FIP4Q86YS3 637 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 MYL10Q9BUA6 226 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 ZNF341Q9BYN7 854 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 KANSL2Q9H9L4 492 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 NMRK2Q9NPI5 230 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 FOXD4L1Q9NU39 408 aa27.27■■□□□ 1.96
LONRF3-204ENST00000439603 GREB1LQ9C091 1923 aaPredicted RBP27.27■■□□□ 1.96
LONRF3-204ENST00000439603 GUCY1A2P33402 732 aa27.26■■□□□ 1.95
LONRF3-204ENST00000439603 SEPT2Q15019 361 aa27.26■■□□□ 1.95
LONRF3-204ENST00000439603 PPP4R3BQ5MIZ7 849 aa27.26■■□□□ 1.95
LONRF3-204ENST00000439603 MICU3Q86XE3 530 aa27.26■■□□□ 1.95
LONRF3-204ENST00000439603 INTS4Q96HW7 963 aaKnown RBP27.26■■□□□ 1.95
LONRF3-204ENST00000439603 TMEM47Q9BQJ4 181 aa27.26■■□□□ 1.95
LONRF3-204ENST00000439603 TTLL1O95922 423 aa27.25■■□□□ 1.95
LONRF3-204ENST00000439603 CLEC10AQ8IUN9 316 aa27.25■■□□□ 1.95
LONRF3-204ENST00000439603 RXRAP19793 462 aa27.25■■□□□ 1.95
LONRF3-204ENST00000439603 METAP2P50579 478 aaKnown RBP eCLIP27.25■■□□□ 1.95
LONRF3-204ENST00000439603 RCAN1P53805 252 aa27.25■■□□□ 1.95
LONRF3-204ENST00000439603 GLIS2Q9BZE0 524 aaPredicted RBP27.25■■□□□ 1.95
LONRF3-204ENST00000439603 SSC5DA1L4H1 1573 aa27.24■■□□□ 1.95
LONRF3-204ENST00000439603 TOP1P11387 765 aaKnown RBP27.24■■□□□ 1.95
LONRF3-204ENST00000439603 RAB3GAP1Q15042 981 aa27.24■■□□□ 1.95
LONRF3-204ENST00000439603 PNMA1Q8ND90 353 aa27.24■■□□□ 1.95
LONRF3-204ENST00000439603 CLIP2Q9UDT6 1046 aa27.24■■□□□ 1.95
LONRF3-204ENST00000439603 ZNF112Q9UJU3 913 aa27.24■■□□□ 1.95
LONRF3-204ENST00000439603 ZBTB21Q9ULJ3 1066 aa27.24■■□□□ 1.95
LONRF3-204ENST00000439603 DDAH1O94760 285 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 TROAPQ12815 778 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 NUP133Q8WUM0 1156 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 CHMP4CQ96CF2 233 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 NCOA5Q9HCD5 579 aaKnown RBP27.23■■□□□ 1.95
LONRF3-204ENST00000439603 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.23■■□□□ 1.95
LONRF3-204ENST00000439603 CTNND1O60716 968 aaKnown RBP27.23■■□□□ 1.95
LONRF3-204ENST00000439603 CALM1P0DP23 149 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 CALM2P0DP24 149 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 CALM3P0DP25 149 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 LDHDQ86WU2 507 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 CDCA5Q96FF9 252 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 NYAP2Q9P242 653 aa27.23■■□□□ 1.95
LONRF3-204ENST00000439603 GOLGA8AA7E2F4 631 aa27.22■■□□□ 1.95
LONRF3-204ENST00000439603 ASNSP08243 561 aa27.22■■□□□ 1.95
LONRF3-204ENST00000439603 ICA1Q05084 483 aa27.22■■□□□ 1.95
LONRF3-204ENST00000439603 MAP1SQ66K74 1059 aaPredicted RBP27.22■■□□□ 1.95
LONRF3-204ENST00000439603 CCDC144CPQ8IYA2 1237 aa27.22■■□□□ 1.95
LONRF3-204ENST00000439603 NID2Q14112 1375 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 EEF2P13639 858 aaKnown RBP27.21■■□□□ 1.95
LONRF3-204ENST00000439603 ATP2B2Q01814 1243 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 FANCBQ8NB91 859 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 FZD1Q9UP38 647 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 DHX16O60231 1041 aaKnown RBP27.21■■□□□ 1.95
LONRF3-204ENST00000439603 SIAH1Q8IUQ4 282 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 MKL1Q969V6 931 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 KLRG1Q96E93 195 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 WRNIP1Q96S55 665 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 GINM1Q9NU53 330 aa27.21■■□□□ 1.95
LONRF3-204ENST00000439603 CDC27P30260 824 aa27.2■■□□□ 1.94
LONRF3-204ENST00000439603 INPP5BP32019 993 aa27.2■■□□□ 1.94
LONRF3-204ENST00000439603 NF2P35240 595 aa27.2■■□□□ 1.94
LONRF3-204ENST00000439603 FAM217BQ9NTX9 383 aaPredicted RBP27.2■■□□□ 1.94
LONRF3-204ENST00000439603 USP2O75604 605 aaPredicted RBP27.19■■□□□ 1.94
LONRF3-204ENST00000439603 PRKG1Q13976 671 aa27.19■■□□□ 1.94
LONRF3-204ENST00000439603 PPP2R5BQ15173 497 aa27.19■■□□□ 1.94
LONRF3-204ENST00000439603 RTN1Q16799 776 aa27.19■■□□□ 1.94
LONRF3-204ENST00000439603 PPP1R12BO60237 982 aaPredicted RBP27.19■■□□□ 1.94
LONRF3-204ENST00000439603 ADD1P35611 737 aaKnown RBP27.19■■□□□ 1.94
LONRF3-204ENST00000439603 LRRC47Q8N1G4 583 aaKnown RBP27.19■■□□□ 1.94
LONRF3-204ENST00000439603 LLPHQ9BRT6 129 aaKnown RBP27.19■■□□□ 1.94
LONRF3-204ENST00000439603 CCDC196A0A1B0GTZ2 297 aa27.18■■□□□ 1.94
LONRF3-204ENST00000439603 CPLX1O14810 134 aa27.18■■□□□ 1.94
LONRF3-204ENST00000439603 MAP3K14Q99558 947 aa27.18■■□□□ 1.94
LONRF3-204ENST00000439603 SMC3Q9UQE7 1217 aa27.18■■□□□ 1.94
LONRF3-204ENST00000439603 CTCFLQ8NI51 663 aaPredicted RBP27.17■■□□□ 1.94
LONRF3-204ENST00000439603 CWC22Q9HCG8 908 aaKnown RBP27.17■■□□□ 1.94
LONRF3-204ENST00000439603 CTDNEP1O95476 244 aa27.17■■□□□ 1.94
LONRF3-204ENST00000439603 SCYL3Q8IZE3 742 aa27.17■■□□□ 1.94
LONRF3-204ENST00000439603 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.17■■□□□ 1.94
LONRF3-204ENST00000439603 RBM28Q9NW13 759 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms