RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 JAG1P78504 1218 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 MTMR2Q13614 643 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 ANKRD13CQ8N6S4 541 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 HAUS7Q99871 368 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
IRF1-204ENST00000439555 LRRCC1Q9C099 1032 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
IRF1-204ENST00000439555 GJD2Q9UKL4 321 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 ATAD5Q96QE3 1844 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 VCANP13611 3396 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
IRF1-204ENST00000439555 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
IRF1-204ENST00000439555 PAG1Q9NWQ8 432 aa13.88□□□□□ -0.19
IRF1-204ENST00000439555 MORF4L1Q9UBU8 362 aa13.88□□□□□ -0.19
IRF1-204ENST00000439555 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
IRF1-204ENST00000439555 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
IRF1-204ENST00000439555 GDF11O95390 407 aa13.87□□□□□ -0.19
IRF1-204ENST00000439555 GH2P01242 217 aa13.87□□□□□ -0.19
IRF1-204ENST00000439555 GABPAQ06546 454 aa13.87□□□□□ -0.19
IRF1-204ENST00000439555 CERKLQ49MI3 558 aaPredicted RBP13.87□□□□□ -0.19
IRF1-204ENST00000439555 USP17L2Q6R6M4 530 aa13.87□□□□□ -0.19
IRF1-204ENST00000439555 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
IRF1-204ENST00000439555 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
IRF1-204ENST00000439555 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.87□□□□□ -0.19
IRF1-204ENST00000439555 FRMPD3Q5JV73 1810 aa13.87□□□□□ -0.19
IRF1-204ENST00000439555 EYSQ5T1H1 3165 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
IRF1-204ENST00000439555 COL6A1P12109 1028 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 SYN1P17600 705 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 ADD2P35612 726 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 PLCD1P51178 756 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 USP14P54578 494 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
IRF1-204ENST00000439555 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 MAP3K21Q5TCX8 1036 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 GUCD1Q96NT3 240 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 BOLA2Q9H3K6 86 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 PRDM6Q9NQX0 595 aa13.86□□□□□ -0.19
IRF1-204ENST00000439555 SPTBN5Q9NRC6 3674 aaKnown RBP13.85□□□□□ -0.19
IRF1-204ENST00000439555 XRCC5P13010 732 aaKnown RBP13.85□□□□□ -0.19
IRF1-204ENST00000439555 SHMT1P34896 483 aa13.85□□□□□ -0.19
IRF1-204ENST00000439555 HERVK_113P62684 666 aa13.85□□□□□ -0.19
IRF1-204ENST00000439555 ABCB5Q2M3G0 1257 aa13.85□□□□□ -0.19
IRF1-204ENST00000439555 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
IRF1-204ENST00000439555 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
IRF1-204ENST00000439555 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
IRF1-204ENST00000439555 DCP1AQ9NPI6 582 aaPredicted RBP13.85□□□□□ -0.19
IRF1-204ENST00000439555 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
IRF1-204ENST00000439555 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
IRF1-204ENST00000439555 MCM9Q9NXL9 1143 aa13.85□□□□□ -0.19
IRF1-204ENST00000439555 ZSCAN25Q6NSZ9 544 aa13.84□□□□□ -0.19
IRF1-204ENST00000439555 GPRC5AQ8NFJ5 357 aa13.84□□□□□ -0.19
IRF1-204ENST00000439555 EDC3Q96F86 508 aaKnown RBP13.84□□□□□ -0.19
IRF1-204ENST00000439555 ECHDC1Q9NTX5 307 aa13.84□□□□□ -0.19
IRF1-204ENST00000439555 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
IRF1-204ENST00000439555 PFASO15067 1338 aa13.84□□□□□ -0.19
IRF1-204ENST00000439555 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 LCORLQ8N3X6 602 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 RBPJLQ9UBG7 517 aa13.83□□□□□ -0.2
IRF1-204ENST00000439555 MAPK4P31152 587 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 RAB3GAP1Q15042 981 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 LBX2Q6XYB7 198 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 SDR42E1Q8WUS8 393 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
IRF1-204ENST00000439555 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 FEZ1Q99689 392 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 ARMT1Q9H993 441 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
IRF1-204ENST00000439555 SIPA1L1O43166 1804 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 MBD4O95243 580 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 GUCY1A2P33402 732 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 TRIM32Q13049 653 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 TMEM179Q6ZVK1 233 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 SOCS4Q8WXH5 440 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 TRIB2Q92519 343 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 BCL11AQ9H165 835 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
IRF1-204ENST00000439555 LTBP2Q14767 1821 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 RLFQ13129 1914 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 SMARCA5O60264 1052 aaPredicted RBP13.8□□□□□ -0.2
IRF1-204ENST00000439555 VCAM1P19320 739 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
IRF1-204ENST00000439555 ERVK-24P63145 666 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms