RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 BACE1P56817 501 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 HAND2P61296 217 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 PDE4BQ07343 736 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 TAF1CQ15572 869 aaPredicted RBP23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 ANKRD23Q86SG2 305 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 ZNF444Q8N0Y2 327 aaPredicted RBP23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 ACER1Q8TDN7 264 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 DSCC1Q9BVC3 393 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 ANAPC4Q9UJX5 808 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 TACC3Q9Y6A5 838 aa23.16■■□□□ 1.3
SEMA3B-206ENST00000439487 PDHXO00330 501 aa23.15■■□□□ 1.3
SEMA3B-206ENST00000439487 SGSM2O43147 1006 aa23.15■■□□□ 1.3
SEMA3B-206ENST00000439487 SH3D19Q5HYK7 790 aa23.15■■□□□ 1.3
SEMA3B-206ENST00000439487 CLEC10AQ8IUN9 316 aa23.15■■□□□ 1.3
SEMA3B-206ENST00000439487 ZNF287Q9HBT7 754 aa23.15■■□□□ 1.3
SEMA3B-206ENST00000439487 C19orf81C9J6K1 198 aa23.14■■□□□ 1.29
SEMA3B-206ENST00000439487 CRHR2Q13324 411 aa23.14■■□□□ 1.29
SEMA3B-206ENST00000439487 CFHR5Q9BXR6 569 aa23.14■■□□□ 1.29
SEMA3B-206ENST00000439487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.14■■□□□ 1.29
SEMA3B-206ENST00000439487 PTH1RQ03431 593 aa23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 ZYXQ15942 572 aaKnown RBP23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 TREML2Q5T2D2 321 aa23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 PROCA1Q8NCQ7 364 aaPredicted RBP23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 FEZ1Q99689 392 aa23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 ZCCHC17Q9NP64 241 aaKnown RBP23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 TMOD4Q9NZQ9 345 aa23.13■■□□□ 1.29
SEMA3B-206ENST00000439487 A0A1W2PRG0 241 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 ICA1Q05084 483 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 FAM47AQ5JRC9 791 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 USP17L2Q6R6M4 530 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 SIAH1Q8IUQ4 282 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 ESYT1Q9BSJ8 1104 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 NBPF3Q9H094 633 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 ZFYVE28Q9HCC9 887 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 EMILIN3Q9NT22 766 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 AGTPBP1Q9UPW5 1226 aa23.12■■□□□ 1.29
SEMA3B-206ENST00000439487 ZNF213O14771 459 aa23.11■■□□□ 1.29
SEMA3B-206ENST00000439487 GPR25O00155 361 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 CDC45O75419 566 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 TFAP4Q01664 338 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 ATP2B2Q01814 1243 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 TBC1D10CQ8IV04 446 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 KIAA1683Q9H0B3 1180 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 KANSL2Q9H9L4 492 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 ARHGEF10LQ9HCE6 1279 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 PRDM10Q9NQV6 1147 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 TOMM22Q9NS69 142 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 CTNNA3Q9UI47 895 aa23.1■■□□□ 1.29
SEMA3B-206ENST00000439487 ORC4O43929 436 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 FGRP09769 529 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 TSPY3P0CV98 308 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 TSPY8P0CW00 308 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 CYP2C8P10632 490 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 EEF2P13639 858 aaKnown RBP23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 USP14P54578 494 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 RRP12Q5JTH9 1297 aaKnown RBP23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 NEDD1Q8NHV4 660 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 SLC45A1Q9Y2W3 748 aa23.09■■□□□ 1.29
SEMA3B-206ENST00000439487 IGKV6D-41A0A0C4DH26 115 aa23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 RANBP6O60518 1105 aaKnown RBP23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 IMMTQ16891 758 aaKnown RBP23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 AKNAD1Q5T1N1 836 aa23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 ZNF296Q8WUU4 475 aaPredicted RBP23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 C12orf42Q96LP6 360 aa23.08■■□□□ 1.29
SEMA3B-206ENST00000439487 TSPY2A6NKD2 308 aa23.07■■□□□ 1.28
SEMA3B-206ENST00000439487 TLR2O60603 784 aa23.07■■□□□ 1.28
SEMA3B-206ENST00000439487 MFSD6Q6ZSS7 791 aa23.07■■□□□ 1.28
SEMA3B-206ENST00000439487 KIAA1211Q6ZU35 1233 aa23.07■■□□□ 1.28
SEMA3B-206ENST00000439487 PARK7Q99497 189 aaKnown RBP23.07■■□□□ 1.28
SEMA3B-206ENST00000439487 TMX2Q9Y320 296 aa23.07■■□□□ 1.28
SEMA3B-206ENST00000439487 PLIN4Q96Q06 1357 aa23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 PABPC4Q13310 644 aaKnown RBP eCLIP23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 NOM1Q5C9Z4 860 aaKnown RBP23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 KIAA1755Q5JYT7 1200 aa23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 CEP95Q96GE4 821 aa23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 LSG1Q9H089 658 aaKnown RBP23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 CPA4Q9UI42 421 aa23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 U3KPZ7 1027 aaPredicted RBP23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 ADGRA2Q96PE1 1338 aa23.06■■□□□ 1.28
SEMA3B-206ENST00000439487 FKTNO75072 461 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 OSBPP22059 807 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 NKX2-3Q8TAU0 364 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 MAP4K1Q92918 833 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 ASCC2Q9H1I8 757 aaPredicted RBP23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 RNF41Q9H4P4 317 aaPredicted RBP23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 SH2D4AQ9H788 454 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 MTMR4Q9NYA4 1195 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 NYAP2Q9P242 653 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 CLIP2Q9UDT6 1046 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 NEDD4P46934 1319 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 MGAMO43451 1857 aa23.05■■□□□ 1.28
SEMA3B-206ENST00000439487 DOCK3Q8IZD9 2030 aa23.04■■□□□ 1.28
SEMA3B-206ENST00000439487 ZSWIM8A7E2V4 1837 aa23.04■■□□□ 1.28
SEMA3B-206ENST00000439487 PARP14Q460N5 1801 aa23.04■■□□□ 1.28
SEMA3B-206ENST00000439487 NMT2O60551 498 aa23.04■■□□□ 1.28
SEMA3B-206ENST00000439487 PCP11498 1178 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms