RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 USP5P45974 858 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 BACE1P56817 501 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 JAG1P78504 1218 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 IRF5Q13568 498 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 AACSQ86V21 672 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 ERC1Q8IUD2 1116 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 MAGEB6Q8N7X4 407 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 PXYLP1Q8TE99 480 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 DEFB118Q96PH6 123 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 HTATIP2Q9BUP3 242 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 PTPRFP10586 1907 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 MGAMO43451 1857 aa11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 PHIPQ8WWQ0 1821 aa11.16□□□□□ -0.62
AC011228.1-201ENST00000439027 APBB1O00213 710 aa11.16□□□□□ -0.62
AC011228.1-201ENST00000439027 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
AC011228.1-201ENST00000439027 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
AC011228.1-201ENST00000439027 DNAJC18Q9H819 358 aa11.16□□□□□ -0.62
AC011228.1-201ENST00000439027 ZBTB21Q9ULJ3 1066 aa11.16□□□□□ -0.62
AC011228.1-201ENST00000439027 C19orf81C9J6K1 198 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 USP17L10C9JJH3 530 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 IGSF3O75054 1194 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 CCAR1Q8IX12 1150 aaKnown RBP11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 RPAP2Q8IXW5 612 aaPredicted RBP11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 ANTXR1Q9H6X2 564 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 IL1RAPL2Q9NP60 686 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 NR2E3Q9Y5X4 410 aa11.15□□□□□ -0.62
AC011228.1-201ENST00000439027 PEX10O60683 326 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 GH2P01242 217 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 IGHDP01880 384 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 HERVK_113P62684 666 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 HSP90AB4PQ58FF6 505 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 UBE2Q1Q7Z7E8 422 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 METTL16Q86W50 562 aaKnown RBP11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 SIRT2Q8IXJ6 389 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 GPRC5AQ8NFJ5 357 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 FEZ1Q99689 392 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
AC011228.1-201ENST00000439027 MYO5AQ9Y4I1 1855 aaKnown RBP11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 HMGCRP04035 888 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 CYP2B6P20813 491 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 FXR1P51114 621 aaKnown RBP eCLIP11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 TTC6Q86TZ1 520 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 CWC22Q9HCG8 908 aaKnown RBP11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 MORF4L1Q9UBU8 362 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 SERPINB13Q9UIV8 391 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 ATAD5Q96QE3 1844 aa11.13□□□□□ -0.63
AC011228.1-201ENST00000439027 MAGEB6P1A0A0J9YX57 407 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 EVI5O60447 810 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 CAPN2P17655 700 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 TRIM32Q13049 653 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 ABCB5Q2M3G0 1257 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 CERKLQ49MI3 558 aaPredicted RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 CLASRPQ8N2M8 674 aaKnown RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 TXNRD2Q9NNW7 524 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 CABP5Q9NP86 173 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 PAK6Q9NQU5 681 aaPredicted RBP11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
AC011228.1-201ENST00000439027 LOC285556D6RIA3 1793 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 GOLIM4O00461 696 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 HMMRO75330 724 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 PDE6AP16499 860 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 MAPK4P31152 587 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 ERVK-9P63128 1117 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 ERVK-24P63145 666 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 TTF1Q15361 905 aaPredicted RBP11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 Q3C1V9 767 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 SLC9C2Q5TAH2 1124 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 TATDN1Q6P1N9 297 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 TMED8Q6PL24 325 aaPredicted RBP11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 CENPQQ7L2Z9 268 aaPredicted RBP11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 NECAB2Q7Z6G3 386 aa11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
AC011228.1-201ENST00000439027 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms