RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZNF202O95125 648 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 PFKFB1P16118 471 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 USP5P45974 858 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 SSRP1Q08945 709 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 WTAPQ15007 396 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 MCM9Q9NXL9 1143 aa15.99■□□□□ 0.15
PTCHD3-201ENST00000438700 ERICH2A1L162 156 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 PPP4CP60510 307 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 SLC39A14Q15043 492 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 CEP57L1Q8IYX8 460 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 NUP133Q8WUM0 1156 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 USP17L8P0C7I0 530 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 BTDP43251 543 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 DPCR1Q3MIW9 517 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 SBK1Q52WX2 424 aa15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
PTCHD3-201ENST00000438700 FGRP09769 529 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 ZRSR1Q15695 479 aaKnown RBP15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 RTN1Q16799 776 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 ILDR2Q71H61 639 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 MTA3Q9BTC8 594 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 GTPBP4Q9BZE4 634 aaKnown RBP15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 KIAA1468Q9P260 1216 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 TNKSO95271 1327 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 PCP11498 1178 aaKnown RBP15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 TGFBRAP1Q8WUH2 860 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 EYA3Q99504 573 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 KCNJ14Q9UNX9 436 aa15.97■□□□□ 0.15
PTCHD3-201ENST00000438700 GPR75-ASB3A0A0A6YYF3 556 aa15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 G3V3G9 751 aa15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 FMNL1O95466 1100 aaPredicted RBP15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 CMA1P23946 247 aa15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 CNKSR1Q969H4 720 aa15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 CLIC6Q96NY7 704 aa15.96■□□□□ 0.15
PTCHD3-201ENST00000438700 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.14
PTCHD3-201ENST00000438700 ISM2Q6H9L7 571 aa15.96■□□□□ 0.14
PTCHD3-201ENST00000438700 CERS5Q8N5B7 392 aa15.96■□□□□ 0.14
PTCHD3-201ENST00000438700 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.14
PTCHD3-201ENST00000438700 BTBD18B2RXH4 712 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 F8W031 263 aaPredicted RBP15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 ORC4O43929 436 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 IFNAR1P17181 557 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 ARID5BQ14865 1188 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 PTPAQ15257 358 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 SEC23AQ15436 765 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 ZSCAN10Q96SZ4 725 aaPredicted RBP15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 MAP3K14Q99558 947 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 MXD3Q9BW11 206 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 GAKO14976 1311 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 TNNT1P13805 278 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 C12orf60Q5U649 245 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 SHC4Q6S5L8 630 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 SARM1Q6SZW1 724 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 ZNF654Q8IZM8 581 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 TMTC2Q8N394 836 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 ENAHQ8N8S7 591 aaPredicted RBP15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 DBNDD1Q9H9R9 158 aa15.95■□□□□ 0.14
PTCHD3-201ENST00000438700 SYKP43405 635 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 IQCA1Q86XH1 822 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 CERS3Q8IU89 383 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 TEX11Q8IYF3 940 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 CACTINQ8WUQ7 758 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 FAM163AQ96GL9 167 aaPredicted RBP15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 DLEC1Q9Y238 1755 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 NID2Q14112 1375 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 STK36Q9NRP7 1315 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 PDE4BQ07343 736 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 FAM47AQ5JRC9 791 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 DIS3L2Q8IYB7 885 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 ZNF592Q92610 1267 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 SAP30BPQ9UHR5 308 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 DAGLAQ9Y4D2 1042 aa15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 GOLGB1Q14789 3259 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-201ENST00000438700 PLCG2P16885 1265 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 RHBDL3P58872 404 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 SPECC1Q5M775 1068 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 NOSTRINQ8IVI9 506 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 FANCBQ8NB91 859 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 ADAMTSL1Q8N6G6 1762 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 MMP1P03956 469 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 NR5A1Q13285 461 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 NBPF11Q86T75 865 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 AMOTL1Q8IY63 956 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 C7orf43Q8WVR3 580 aa15.93■□□□□ 0.14
PTCHD3-201ENST00000438700 DYNLL2Q96FJ2 89 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms