RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 PYM1Q9BRP8 204 aaKnown RBP9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 DYNC1I1O14576 645 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 ZBTB7AO95365 584 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 TXKP42681 527 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 UBASH3AP57075 661 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 WWC2Q6AWC2 1192 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 ZNF34Q8IZ26 560 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 CCDC112Q8NEF3 446 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 CCDC94Q9BW85 323 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 RGS12O14924 1447 aa9.18□□□□□ -0.94
TMEM39A-202ENST00000438581 PXDNQ92626 1479 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 POLR2DO15514 142 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 CAVIN2O95810 425 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 TTC38Q5R3I4 469 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 IQUBQ8NA54 791 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 ATP10DQ9P241 1426 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 KLRF2D3W0D1 207 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 NPR1P16066 1061 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 TMEM63CQ9P1W3 806 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 DCCP43146 1447 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 CCNT1O60563 726 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 TBCAO75347 108 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 SEMA3FQ13275 785 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 UVSSAQ2YD98 709 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 ATL3Q6DD88 541 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 KIAA1328Q86T90 577 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 GPKOWQ92917 476 aaPredicted RBP eCLIP9.17□□□□□ -0.941e-6■■■■■ 44.7
TMEM39A-202ENST00000438581 RBSNQ9H1K0 784 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 HOMER2Q9NSB8 354 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 H7C1D1 291 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 ADRA2BP18089 450 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 CACNB3P54284 484 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 MAPK8IP2Q13387 824 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 PPP2R5BQ15173 497 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 CERKLQ49MI3 558 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 FNBP4Q8N3X1 1017 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 TMX1Q9H3N1 280 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 TTC12Q9H892 705 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 MAPK8IP1Q9UQF2 711 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 NCOA3Q9Y6Q9 1424 aa9.17□□□□□ -0.94
TMEM39A-202ENST00000438581 MED23Q9ULK4 1368 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 C16orf45Q96MC5 204 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 MMRN2Q9H8L6 949 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 CFBP00751 764 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 ZNF397Q8NF99 534 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 SH2D4AQ9H788 454 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 LUC7LQ9NQ29 371 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 FGFR1OPO95684 399 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 PSMC1P62191 440 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 TDRD12Q587J7 1177 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 LSM14AQ8ND56 463 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 FBXO18Q8NFZ0 1043 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 CD209Q9NNX6 404 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 ZMYM6O95789 1325 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 CARMIL3Q8ND23 1372 aa9.16□□□□□ -0.94
TMEM39A-202ENST00000438581 SMCO2A6NFE2 343 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 ZNF202O95125 648 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 CYP2D6P10635 497 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 PTPN14Q15678 1187 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 CCDC174Q6PII3 467 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 TMC4Q7Z404 712 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 NSUN7Q8NE18 718 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 FAM84BQ96KN1 310 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 AIFM3Q96NN9 605 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 BIN2Q9UBW5 565 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 ELP1O95163 1332 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 PSMA7O14818 248 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 CHMP2AO43633 222 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 CUL4AQ13619 759 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 NONOQ15233 471 aaKnown RBP eCLIP9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 GPR162Q16538 588 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 NSMFQ6X4W1 530 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 SPICE1Q8N0Z3 855 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 KDM6AO15550 1401 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-202ENST00000438581 COPB2P35606 906 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 PPP4R3AQ6IN85 833 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 TTLL6Q8N841 843 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 C3P01024 1663 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 UBR1Q8IWV7 1749 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 KIF20BQ96Q89 1820 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 CSF1RP07333 972 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 DNA2P51530 1060 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 ADCY7P51828 1080 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 ZNF280DQ6N043 979 aa9.15□□□□□ -0.95
TMEM39A-202ENST00000438581 REXO1Q8N1G1 1221 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms