RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 PORCNQ9H237 461 aa17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 BAZ2AQ9UIF9 1905 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-203ENST00000437813 APBB1O00213 710 aa17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ERVK-24P63145 666 aa17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 CERKLQ49MI3 558 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MORN1Q5T089 497 aa17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 LBX2Q6XYB7 198 aa17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
TNFRSF1A-203ENST00000437813 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 CHGBP05060 677 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 VCAM1P19320 739 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ADD2P35612 726 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 ABCB5Q2M3G0 1257 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 CATSPERGQ6ZRH7 1159 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 DNAJC2Q99543 621 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 HAUS7Q99871 368 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
TNFRSF1A-203ENST00000437813 A0A1W2PRG0 241 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MAPK4P31152 587 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 SOCS4Q8WXH5 440 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 RABGAP1Q9Y3P9 1069 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 PARP14Q460N5 1801 aa17.46■□□□□ 0.39
TNFRSF1A-203ENST00000437813 MYH8P13535 1937 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L15C9J2P7 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L13C9JLJ4 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L11C9JVI0 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L18D6R9N7 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L22D6RA61 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L17D6RBQ6 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L19D6RCP7 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L20D6RJB6 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 PRKAB2O43741 272 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 IGHA2P01877 340 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CYP2D6P10635 497 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP14P54578 494 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 USP17L24Q0WX57 530 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 SEPT2Q15019 361 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 GPR142Q7Z601 462 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 SLC44A5Q8NCS7 719 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 DIS3LQ8TF46 1054 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 HTATIP2Q9BUP3 242 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 BOLA2Q9H3K6 86 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 ARMT1Q9H993 441 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
TNFRSF1A-203ENST00000437813 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 ZYXQ15942 572 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 KIAA1755Q5JYT7 1200 aa17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 ANKLE1Q8NAG6 615 aa17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 DPF3Q92784 378 aa17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 NUDT12Q9BQG2 462 aa17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 BTBD7Q9P203 1132 aa17.44■□□□□ 0.38
TNFRSF1A-203ENST00000437813 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 FRMPD3Q5JV73 1810 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 ZNF236Q9UL36 1845 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 SPDYE16A6NNV3 312 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CYP2B6P20813 491 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 UBE3CQ15386 1083 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CCL14Q16627 93 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 PAWRQ96IZ0 340 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 FEZ1Q99689 392 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 PAGR1Q9BTK6 254 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 HMX1Q9NP08 348 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 RBM27Q9P2N5 1060 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 OGDHLQ9ULD0 1010 aa17.43■□□□□ 0.38
TNFRSF1A-203ENST00000437813 MBD4O95243 580 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 C12orf60Q5U649 245 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CHRDL2Q6WN34 429 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 PLEKHH3Q7Z736 793 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 DYNLL2Q96FJ2 89 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 LRRCC1Q9C099 1032 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CABP5Q9NP86 173 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 ATP8A2Q9NTI2 1148 aa17.42■□□□□ 0.38
TNFRSF1A-203ENST00000437813 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 HOXC6P09630 235 aa17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CACNB2Q08289 660 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 APBA2Q99767 749 aa17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 RPAP3Q9H6T3 665 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 SWAP70Q9UH65 585 aa17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 MAP2K5Q13163 448 aa17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 LHX8Q68G74 356 aa17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 TMEM179Q6ZVK1 233 aa17.4■□□□□ 0.38
TNFRSF1A-203ENST00000437813 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms