RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 TJP2Q9UDY2 1190 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 CDC45O75419 566 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 CLEC3AO75596 197 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 HCLS1P14317 486 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 IBSPP21815 317 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 ITGB7P26010 798 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 GATA4P43694 442 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 ADGRE1Q14246 886 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 ZC3H12BQ5HYM0 836 aaKnown RBP6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 KIAA1211LQ6NV74 962 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 SHISA2Q6UWI4 295 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 JAZF1Q86VZ6 243 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 LRRC47Q8N1G4 583 aaKnown RBP6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 GIMAP7Q8NHV1 300 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 THAP3Q8WTV1 239 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 CYB5D2Q8WUJ1 264 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 IPO9Q96P70 1041 aaKnown RBP6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
HMGB1P45-201ENST00000435986 FAM221BA6H8Z2 402 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 PPM1GO15355 546 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 LRIG2O94898 1065 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 WISP1O95388 367 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 CST3P01034 146 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 GLB1P16278 677 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 RNF4P78317 190 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 SSRP1Q08945 709 aaKnown RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 DOC2BQ14184 412 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 MAP7Q14244 749 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 MBTPS1Q14703 1052 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 EGFLAMQ63HQ2 1017 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 ANKRD13AQ8IZ07 590 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 SH3TC2Q8TF17 1288 aa6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 LENG1Q96BZ8 264 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 RNPC3Q96LT9 517 aaKnown RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 ZNF214Q9UL59 606 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P45-201ENST00000435986 KDM2BQ8NHM5 1336 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 TIAF1O95411 115 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 DRD2P14416 443 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 CYP7A1P22680 504 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 TCEAL1Q15170 157 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 SLC26A8Q96RN1 970 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 KIF2CQ99661 725 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 APBA2Q99767 749 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 GBP3Q9H0R5 595 aa6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 GSX1Q9H4S2 264 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 SUCOQ9UBS9 1254 aaKnown RBP6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB1P45-201ENST00000435986 SBNO2Q9Y2G9 1366 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 CCDC163A0A0D9SF12 145 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 FAM86C2PA6NEL3 165 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 UPK3BL1B0FP48 263 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 UPK3BL2E5RIL1 263 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 ACRP10323 421 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 ETV3P41162 512 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 LONRF2Q1L5Z9 754 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 C2orf27AQ580R0 203 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 PRAMEF13Q5VWM6 474 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 HEATR6Q6AI08 1181 aaKnown RBP6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 CCDC144CPQ8IYA2 1237 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 NLGN1Q8N2Q7 840 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 CRACR2BQ8N4Y2 399 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 ZSWIM2Q8NEG5 633 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 ISL2Q96A47 359 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 SGSM3Q96HU1 749 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 LRP2BPQ9P2M1 347 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 PRKAB1Q9Y478 270 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 ACTL7BQ9Y614 415 aa6.5□□□□□ -1.37
HMGB1P45-201ENST00000435986 ANKRD34BA5PLL1 514 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 SUSD5O60279 629 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 DNAJA2O60884 412 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 RAB6AP20340 208 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 RXRBP28702 533 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 TCEA2Q15560 299 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 ZYXQ15942 572 aaKnown RBP6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 SV2CQ496J9 727 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 MICAL1Q8TDZ2 1067 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 MKRN2Q9H000 416 aaKnown RBP6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 FANCLQ9NW38 375 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 LTBP3Q9NS15 1303 aa6.49□□□□□ -1.37
HMGB1P45-201ENST00000435986 PPM1BO75688 479 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 NEFMP07197 916 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 SLBPQ14493 270 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 PLEKHG4Q58EX7 1191 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 C16orf86Q6ZW13 317 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 TXNRD3Q86VQ6 643 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 AGGF1Q8N302 714 aaeCLIP6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 COX4I2Q96KJ9 171 aa6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 DPH2Q9BQC3 489 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P45-201ENST00000435986 SPATA9Q9BWV2 254 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms