RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 NPY5RQ15761 445 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 LINC00116Q8NCU8 138 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 DHX58Q96C10 678 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 RNF26Q9BY78 433 aaPredicted RBP11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 WNK3Q9BYP7 1800 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 ZNF18P17022 549 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 AFMP43652 599 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 CTR9Q6PD62 1173 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 FBXO38Q6PIJ6 1188 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 TRIM65Q6PJ69 517 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 SMARCE1Q969G3 411 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 IFIT1BQ5T764 474 aaKnown RBP11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 PHF20Q9BVI0 1012 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 L2HGDHQ9H9P8 463 aa11.89□□□□□ -0.51
CLSTN1-203ENST00000435891 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 KCNJ6P48051 423 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 FAM47AQ5JRC9 791 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 HOMER1Q86YM7 354 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 TEX2Q8IWB9 1127 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 SMYD4Q8IYR2 804 aaPredicted RBP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 STAMQ92783 540 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 CBFA2T2O43439 604 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 CYP2D6P10635 497 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 KRT222Q8N1A0 295 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 MTA3Q9BTC8 594 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 COBLO75128 1261 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 UBE4AQ14139 1066 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 ZNF174Q15697 407 aa11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLSTN1-203ENST00000435891 TRIM75PA6NK02 468 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 NUTM2BA6NNL0 878 aaPredicted RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 NUTM2EB1AL46 878 aaPredicted RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 PRDX5P30044 214 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 STX17P56962 302 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 ETF1P62495 437 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 AKAP17AQ02040 695 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 TBX2Q13207 712 aaPredicted RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 NUTM2AQ8IVF1 878 aaPredicted RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 SPATA20Q8TB22 786 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 RCAN1P53805 252 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 SF3B3Q15393 1217 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 KLHL10Q6JEL2 608 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 MYH13Q9UKX3 1938 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 RREB1Q92766 1687 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 KRT2P35908 639 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 MECOMQ03112 1051 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 ENOX1Q8TC92 643 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 GNL3LQ9NVN8 582 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 DDX41Q9UJV9 622 aaKnown RBP11.87□□□□□ -0.51
CLSTN1-203ENST00000435891 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 TEX33O43247 280 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 PRPF3O43395 683 aaKnown RBP11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 CATIPQ7Z7H3 387 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 BRIP1Q9BX63 1249 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 LAMB2P55268 1798 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 SLFN14P0C7P3 912 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 TERF2Q15554 542 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 TOGARAM2Q6ZUX3 1019 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 ZNF652Q9Y2D9 606 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 APTXQ7Z2E3 356 aaKnown RBP11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 IQCA1Q86XH1 822 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 CNTNAP5Q8WYK1 1306 aa11.86□□□□□ -0.51
CLSTN1-203ENST00000435891 NRDCO43847 1150 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 FGRP09769 529 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 DPYDQ12882 1025 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 TMTC3Q6ZXV5 915 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 FBXO33Q7Z6M2 555 aa11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
CLSTN1-203ENST00000435891 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms