RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 TBC1D12O60347 775 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
CPNE1-214ENST00000435747 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-214ENST00000435747 CYBAP13498 195 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 MTMR2Q13614 643 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 HERVK_113Q902F9 699 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
CPNE1-214ENST00000435747 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 SLC15A5A6NIM6 579 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 PDE8BO95263 885 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
CPNE1-214ENST00000435747 CCNA1P78396 465 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 LRRC41Q15345 812 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 VGLL2Q8N8G2 317 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 UIMC1Q96RL1 719 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 NKX2-4Q9H2Z4 354 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 SLC28A3Q9HAS3 691 aa12.93□□□□□ -0.34
CPNE1-214ENST00000435747 DDX4Q9NQI0 724 aaKnown RBP12.93□□□□□ -0.34
CPNE1-214ENST00000435747 TLL1O43897 1013 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 HOXC6P09630 235 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 PTPREP23469 700 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 CAP2P40123 477 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 RFX5P48382 616 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-214ENST00000435747 BACE1P56817 501 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 LRRC24Q50LG9 513 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 NPLOC4Q8TAT6 608 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 IVNS1ABPQ9Y6Y0 642 aa12.92□□□□□ -0.34
CPNE1-214ENST00000435747 SEPT4O43236 478 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 PPIGQ13427 754 aaKnown RBP eCLIP12.91□□□□□ -0.344e-18■□□□□ 11.3
CPNE1-214ENST00000435747 PUM3Q15397 648 aaKnown RBP12.91□□□□□ -0.34
CPNE1-214ENST00000435747 TMEM240Q5SV17 173 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 WDR18Q9BV38 432 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 SMC4Q9NTJ3 1288 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 COG5Q9UP83 839 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
CPNE1-214ENST00000435747 USP34Q70CQ2 3546 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 TIMP1P01033 207 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
CPNE1-214ENST00000435747 GRB14Q14449 540 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 FBXL18Q96ME1 805 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 KCNH6Q9H252 994 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
CPNE1-214ENST00000435747 GAKO14976 1311 aa12.89□□□□□ -0.35
CPNE1-214ENST00000435747 PTPRZ1P23471 2315 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-214ENST00000435747 DCDC2CA8MYV0 355 aa12.89□□□□□ -0.35
CPNE1-214ENST00000435747 FAAP100Q0VG06 881 aa12.89□□□□□ -0.35
CPNE1-214ENST00000435747 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
CPNE1-214ENST00000435747 FAM47AQ5JRC9 791 aa12.89□□□□□ -0.35
CPNE1-214ENST00000435747 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-214ENST00000435747 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
CPNE1-214ENST00000435747 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
CPNE1-214ENST00000435747 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-214ENST00000435747 SLC5A1P13866 664 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 FGFR2P21802 821 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 BTDP43251 543 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 FOXK2Q01167 660 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 RRP1BQ14684 758 aaKnown RBP12.88□□□□□ -0.35
CPNE1-214ENST00000435747 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 MFSD5Q6N075 450 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 C16orf59Q7L2K0 433 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
CPNE1-214ENST00000435747 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
CPNE1-214ENST00000435747 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-214ENST00000435747 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 APBB1O00213 710 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 CNMDO75829 334 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 IGHA2P01877 340 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 ASNSP08243 561 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 PPP2R2DQ66LE6 453 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 ANKRD33Q7Z3H0 272 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 RNF180Q86T96 592 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
CPNE1-214ENST00000435747 MIER1Q8N108 512 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 ARHGAP45Q92619 1136 aa12.87□□□□□ -0.35
CPNE1-214ENST00000435747 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
CPNE1-214ENST00000435747 GNL3LQ9NVN8 582 aaKnown RBP12.87□□□□□ -0.35
CPNE1-214ENST00000435747 ACRP10323 421 aa12.86□□□□□ -0.35
CPNE1-214ENST00000435747 CSF2RAP15509 400 aa12.86□□□□□ -0.35
CPNE1-214ENST00000435747 TMEM199Q8N511 208 aa12.86□□□□□ -0.35
CPNE1-214ENST00000435747 HLA-CQ95604 372 aa12.86□□□□□ -0.35
CPNE1-214ENST00000435747 XPNPEP3Q9NQH7 507 aa12.86□□□□□ -0.35
CPNE1-214ENST00000435747 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms