RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 TRIM34Q9BYJ4 488 aa17.63■□□□□ 0.41
TMEM40-204ENST00000435218 ADARB2Q9NS39 739 aaKnown RBP17.63■□□□□ 0.41
TMEM40-204ENST00000435218 FAM217BQ9NTX9 383 aaPredicted RBP17.63■□□□□ 0.41
TMEM40-204ENST00000435218 CDKL5O76039 1030 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 PDCP20941 246 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 RASA3Q14644 834 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 NTRK3Q16288 839 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 CERKLQ49MI3 558 aaPredicted RBP17.62■□□□□ 0.41
TMEM40-204ENST00000435218 CPLX2Q6PUV4 134 aaKnown RBP17.62■□□□□ 0.41
TMEM40-204ENST00000435218 FANCBQ8NB91 859 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 TRPM4Q8TD43 1214 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 TEPSINQ96N21 525 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 TMEM39BQ9GZU3 492 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 MTMR4Q9NYA4 1195 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 KIF3AQ9Y496 699 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 TCHHQ07283 1943 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 CPLX1O14810 134 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 CDC27P30260 824 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 RTN1Q16799 776 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 RGS22Q8NE09 1264 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 CEP95Q96GE4 821 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 MYL10Q9BUA6 226 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
TMEM40-204ENST00000435218 PPP2R3BQ9Y5P8 575 aa17.62■□□□□ 0.41
TMEM40-204ENST00000435218 GLTPD2A6NH11 291 aa17.61■□□□□ 0.41
TMEM40-204ENST00000435218 JAK2O60674 1132 aa17.61■□□□□ 0.41
TMEM40-204ENST00000435218 BRD1O95696 1058 aa17.61■□□□□ 0.41
TMEM40-204ENST00000435218 IFNAR1P17181 557 aa17.61■□□□□ 0.41
TMEM40-204ENST00000435218 ADD1P35611 737 aaKnown RBP17.61■□□□□ 0.41
TMEM40-204ENST00000435218 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
TMEM40-204ENST00000435218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.61■□□□□ 0.41
TMEM40-204ENST00000435218 STX8Q9UNK0 236 aa17.61■□□□□ 0.41
TMEM40-204ENST00000435218 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 FAM196BA6NMK8 535 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 TOP1P11387 765 aaKnown RBP17.6■□□□□ 0.41
TMEM40-204ENST00000435218 RXRAP19793 462 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 SYT1P21579 422 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
TMEM40-204ENST00000435218 TMEM179Q6ZVK1 233 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 RAB11FIP4Q86YS3 637 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 ZDHHC9Q9Y397 364 aa17.6■□□□□ 0.41
TMEM40-204ENST00000435218 ASTN2O75129 1339 aaPredicted RBP17.59■□□□□ 0.41
TMEM40-204ENST00000435218 WDR33Q9C0J8 1336 aaKnown RBP17.59■□□□□ 0.41
TMEM40-204ENST00000435218 STX6O43752 255 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 TTLL1O95922 423 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 SLURP2P0DP57 97 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 PKP1Q13835 747 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 ANGEL2Q5VTE6 544 aaKnown RBP17.59■□□□□ 0.41
TMEM40-204ENST00000435218 DEFB129Q9H1M3 183 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 KANSL2Q9H9L4 492 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 PAPPA2Q9BXP8 1791 aa17.59■□□□□ 0.41
TMEM40-204ENST00000435218 FDPSP14324 419 aaKnown RBP17.58■□□□□ 0.41
TMEM40-204ENST00000435218 KIF5BP33176 963 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 GRM4Q14833 912 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 CTCFLQ8NI51 663 aaPredicted RBP17.58■□□□□ 0.41
TMEM40-204ENST00000435218 NUP133Q8WUM0 1156 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 HOOK2Q96ED9 719 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 NYAP2Q9P242 653 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 SYNPO2Q9UMS6 1093 aa17.58■□□□□ 0.41
TMEM40-204ENST00000435218 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
TMEM40-204ENST00000435218 CLEC17AQ6ZS10 378 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 USP50Q70EL3 339 aaPredicted RBP17.57■□□□□ 0.4
TMEM40-204ENST00000435218 CDAN1Q8IWY9 1227 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 MKL1Q969V6 931 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 GGA3Q9NZ52 723 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 MPHOSPH10O00566 681 aaKnown RBP17.57■□□□□ 0.4
TMEM40-204ENST00000435218 GUCY1A2P33402 732 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 FUT2Q10981 343 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 NBPF11Q86T75 865 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 RNF26Q9BY78 433 aaPredicted RBP17.57■□□□□ 0.4
TMEM40-204ENST00000435218 CABP5Q9NP86 173 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 GINM1Q9NU53 330 aa17.57■□□□□ 0.4
TMEM40-204ENST00000435218 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
TMEM40-204ENST00000435218 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
TMEM40-204ENST00000435218 PHIPQ8WWQ0 1821 aa17.56■□□□□ 0.4
TMEM40-204ENST00000435218 IQCA1LA6NCM1 817 aa17.56■□□□□ 0.4
TMEM40-204ENST00000435218 FMNL1O95466 1100 aaPredicted RBP17.56■□□□□ 0.4
TMEM40-204ENST00000435218 GNAQP50148 359 aa17.56■□□□□ 0.4
TMEM40-204ENST00000435218 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
TMEM40-204ENST00000435218 ZC3H15Q8WU90 426 aaKnown RBP17.56■□□□□ 0.4
TMEM40-204ENST00000435218 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
TMEM40-204ENST00000435218 MTMR6Q9Y217 621 aa17.56■□□□□ 0.4
TMEM40-204ENST00000435218 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
TMEM40-204ENST00000435218 ZSCAN22P10073 491 aaPredicted RBP17.55■□□□□ 0.4
TMEM40-204ENST00000435218 DCAF15Q66K64 600 aa17.55■□□□□ 0.4
TMEM40-204ENST00000435218 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
TMEM40-204ENST00000435218 OTOFQ9HC10 1997 aa17.55■□□□□ 0.4
TMEM40-204ENST00000435218 PALM3A6NDB9 673 aaPredicted RBP17.54■□□□□ 0.4
TMEM40-204ENST00000435218 PHF20L1A8MW92 1017 aa17.54■□□□□ 0.4
TMEM40-204ENST00000435218 DTNBO60941 627 aa17.54■□□□□ 0.4
TMEM40-204ENST00000435218 GDF11O95390 407 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms